PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022770051.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 367aa MW: 41827.8 Da PI: 9.866

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022770051.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.8	4.6e-17	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll+ +vkq+G++ W++I+++mg ++R +k+c +rw +yl XP_022770051.1 4 RQRWQPEEDALLKSYVKQYGPKEWNLISQRMGkpLNRDPKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	35.4	2.5e-11	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l + + +++G++ Wk+Ia++++ gRt+k + +w + XP_022770051.1 59 KGSLTPEEQSLVISLQAKYGNK-WKKIASEVP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MKERQRWQPE EDALLKSYVK QYGPKEWNLI SQRMGKPLNR DPKSCLERWK NYLKPGIKKG 60 SLTPEEQSLV ISLQAKYGNK WKKIASEVPG RTAKRLGKWW EVFKEKQLKQ LQKKQGRKEF 120 SPEGSSSVIT PAVSSSPGQY DHILETFAEK YVQPNNKFLA TYSTMNLSPI MPPTISLPDP 180 DPVLSLGSGS SGTATTSSSV VLPLWMNHNH TTSSLSSSTS STTPSPSVSL SLSPGEPALD 240 PDLTRFIPGQ VCTLVQYCKE LEEGRQNWMQ HKKEATWRLS RLEQQLESEK ARKRREKMEE 300 IEAKIRCLRE EEMAFLGRIE SEYKEQLNVL QRDAETKEAK LMEAWSSKHV KLAKLMEQIG 360 FTTQSPP

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MKERQRWQPE EDALLKSYVK QYGPKEWNLI SQRMGKPLNR DPKSCLERWK NYLKPGIKKG  60
SLTPEEQSLV ISLQAKYGNK WKKIASEVPG RTAKRLGKWW EVFKEKQLKQ LQKKQGRKEF  120
SPEGSSSVIT PAVSSSPGQY DHILETFAEK YVQPNNKFLA TYSTMNLSPI MPPTISLPDP  180
DPVLSLGSGS SGTATTSSSV VLPLWMNHNH TTSSLSSSTS STTPSPSVSL SLSPGEPALD  240
PDLTRFIPGQ VCTLVQYCKE LEEGRQNWMQ HKKEATWRLS RLEQQLESEK ARKRREKMEE  300
IEAKIRCLRE EEMAFLGRIE SEYKEQLNVL QRDAETKEAK LMEAWSSKHV KLAKLMEQIG  360
FTTQSPP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	292	297	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	5e-61	MYB family protein