PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022770082.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YA
Protein Properties Length: 333aa    MW: 36165.4 Da    PI: 8.6199
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022770082.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.29.7e-32165221158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep++VNaKQy++Il+RRq Rak+e ekk+ +k rkpylheSRh hA+rR+Rg+gGrF
  XP_022770082.1 165 EEPVFVNAKQYHGILRRRQIRAKAELEKKV-IKVRKPYLHESRHLHAMRRARGCGGRF 221
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MPAKPGNKDQ RMDHGAQSVL QSTAYSEPWW KGVAPNPFGE AASKSTFIEQ LKGSVADGAV  60
HSQAHGGMGN GDIDAVIVLG SDGRNGQDRQ HLKHVPSKGP VSFGEHLEPN SQMELVGHSI  120
VLTSYPYSDP QYGGILTSYG PQMMVSPHLY GMLHARMPLP LQMEEEPVFV NAKQYHGILR  180
RRQIRAKAEL EKKVIKVRKP YLHESRHLHA MRRARGCGGR FLNTKKVDDD VTSSTSEKGI  240
NSDENVSTKS AHLSQSVCVS ANGTGNLNSF YVQQEGNGSL VQDMHKAQPL ANGNSNGRGL  300
SLAYHSSSND AVEGNYFGQQ RDIVEGNGAP SIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.28e-51NF-YA family protein