PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022770083.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YA
Protein Properties Length: 323aa    MW: 35182.2 Da    PI: 9.175
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022770083.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.39.3e-32155211158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep++VNaKQy++Il+RRq Rak+e ekk+ +k rkpylheSRh hA+rR+Rg+gGrF
  XP_022770083.1 155 EEPVFVNAKQYHGILRRRQIRAKAELEKKV-IKVRKPYLHESRHLHAMRRARGCGGRF 211
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MPAKPGNKDQ RMDHGAQSVL QSTAYSEPWW KGVAPNPFGE AASKSTFIEQ LKGSVADGAV  60
HSQAHGGMGN GDGRNGQDRQ HLKHVPSKGP VSFGEHLEPN SQMELVGHSI VLTSYPYSDP  120
QYGGILTSYG PQMMVSPHLY GMLHARMPLP LQMEEEPVFV NAKQYHGILR RRQIRAKAEL  180
EKKVIKVRKP YLHESRHLHA MRRARGCGGR FLNTKKVDDD VTSSTSEKGI NSDENVSTKS  240
AHLSQSVCVS ANGTGNLNSF YVQQEGNGSL VQDMHKAQPL ANGNSNGRGL SLAYHSSSND  300
AVEGNYFGQQ RDIVEGNGAP SIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.14e-47NF-YA family protein