PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022770122.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 258aa    MW: 29569.8 Da    PI: 8.9371
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022770122.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.96.6e-29959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien   rqvtfskRr+g+lKKA ELS+LCdaevaviifs+tgkl+e+ss
  XP_022770122.1  9 KRIENANSRQVTFSKRRAGLLKKARELSILCDAEVAVIIFSNTGKLFEFSS 59
                    79***********************************************96 PP
2K-box64.92.9e-22781765100
           K-box   5 sgksleeakaeslqqelakLkkeienLqreq...RhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 
                     +  ++e++ +++ ++e+++Lk+ei +Lq +q   R+llG++L s+s+keLq LeqqL+++l ++++kK++ll+eq+e+++ +e+++  en++Lr+
  XP_022770122.1  78 EIAQVENKVEKQDSKEADNLKDEIAKLQMKQsfyRQLLGKNLISMSMKELQLLEQQLNEGLLSVKEKKEQLLMEQLEQSRLQEQRAMLENETLRR 172
                     3444778888999***************655455************************************************************* PP

           K-box  97 klee 100
                     ++ee
  XP_022770122.1 173 QVEE 176
                     *987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MGRGKIEIKR IENANSRQVT FSKRRAGLLK KARELSILCD AEVAVIIFSN TGKLFEFSSS  60
GMKKTISRYN KCSQGSSEIA QVENKVEKQD SKEADNLKDE IAKLQMKQSF YRQLLGKNLI  120
SMSMKELQLL EQQLNEGLLS VKEKKEQLLM EQLEQSRLQE QRAMLENETL RRQVEELRGF  180
FPLTDRPVQS YLECYPVERK NSLMSHSIPS TDVTCNCTVE KGDSDTALYL GLPSNHHKRK  240
KPERETNSND SESQLGLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13790.11e-70MIKC_MADS family protein