PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022770123.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 255aa MW: 29103.2 Da PI: 8.7106

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022770123.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	90.9	6.4e-29	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien rqvtfskRr+g+lKKA ELS+LCdaevaviifs+tgkl+e+ss XP_022770123.1 9 KRIENANSRQVTFSKRRAGLLKKARELSILCDAEVAVIIFSNTGKLFEFSS 59 79***********************************************96 PP
2	K-box	68.3	2.6e-23	78	173	5	100
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + ++e++ +++ ++e+++Lk+ei +Lq +q +llG++L s+s+keLq LeqqL+++l ++++kK++ll+eq+e+++ +e+++ en++Lr+++e XP_022770123.1 78 EIAQVENKVEKQDSKEADNLKDEIAKLQMKQSQLLGKNLISMSMKELQLLEQQLNEGLLSVKEKKEQLLMEQLEQSRLQEQRAMLENETLRRQVE 172 3444778888999********************************************************************************98 PP K-box 100 e 100 e XP_022770123.1 173 E 173 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MGRGKIEIKR IENANSRQVT FSKRRAGLLK KARELSILCD AEVAVIIFSN TGKLFEFSSS 60 GMKKTISRYN KCSQGSSEIA QVENKVEKQD SKEADNLKDE IAKLQMKQSQ LLGKNLISMS 120 MKELQLLEQQ LNEGLLSVKE KKEQLLMEQL EQSRLQEQRA MLENETLRRQ VEELRGFFPL 180 TDRPVQSYLE CYPVERKNSL MSHSIPSTDV TCNCTVEKGD SDTALYLGLP SNHHKRKKPE 240 RETNSNDSES QLGLM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13790.1	2e-72	MIKC_MADS family protein