PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022770204.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 298aa MW: 33005 Da PI: 8.3328

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022770204.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56	6.7e-18	128	182	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +k+ +++keq +Lee F+++++++++++ LAk+l+L rqV vWFqNrRa+ k XP_022770204.1 128 KKKLRLSKEQSLVLEENFKEHSTLNTKQKLALAKQLNLRPRQVEVWFQNRRARTK 182 778899***********************************************98 PP
2	HD-ZIP_I/II	120.9	6.5e-39	128	217	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlskeq+ +LEe+F+e+++L++++K +la++L+l+prqv+vWFqnrRARtk kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l XP_022770204.1 128 KKKLRLSKEQSLVLEENFKEHSTLNTKQKLALAKQLNLRPRQVEVWFQNRRARTKFKQTEVDCEYLKRCCENLREENRRLQKEVQELR-AL 217 59*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MGDKDDGLGL RLSLGCAQNQ PSLKLNLTPL ASTRMQNVQQ KNSWNELFQS SDRHLDARSF 60 LGGIDVNQAP AMVDCEEEGG LSSPNSTVSS ISGKRNERDP VSDETEAERA SCSLACDDED 120 GAAGDASKKK LRLSKEQSLV LEENFKEHST LNTKQKLALA KQLNLRPRQV EVWFQNRRAR 180 TKFKQTEVDC EYLKRCCENL REENRRLQKE VQELRALKLS PQLYLHMNPP TTLTMCPSCE 240 RASVSSSSSS AAAASSTPTS AVPNRHQMSS SHQRPVPVSP WAALPISHRP FNAPASRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	127	133	SKKKLRL
2	177	185	RRARTKFKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60390.1	1e-77	HD-ZIP family protein