PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022770303.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 204aa    MW: 22353.5 Da    PI: 8.2206
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022770303.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260127.56.3e-4091091100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC+k+C++apyf ++q +++fa+vhk+FGasn +k+l+++p ++r da+ +l+yeA  r+rdPvyG+vg+i++lqqq e l+ael
  XP_022770303.1   9 PCGACKFLRRKCVKGCIFAPYFDSDQgTADFAAVHKVFGASNASKMLQRIPAHKRVDAVVTLCYEALSRVRDPVYGCVGHIFTLQQQAEILQAEL 103
                     7***********************9988******************************************************************* PP

          DUF260  95 allkee 100
                     a+++++
  XP_022770303.1 104 AYIQAR 109
                     *99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MSANNGGGPC GACKFLRRKC VKGCIFAPYF DSDQGTADFA AVHKVFGASN ASKMLQRIPA  60
HKRVDAVVTL CYEALSRVRD PVYGCVGHIF TLQQQAEILQ AELAYIQARL SALPRLPQMP  120
PFQAQGQCPS PSSLHATSDI GSHLVSSSNM SMHFDPPQPQ HPSIELTSFP NPFDQGMENK  180
ELQALAREFV SRYLHLPAKT SNCY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00210.19e-56LBD family protein