PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022770304.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 226aa    MW: 23776 Da    PI: 7.7545
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022770304.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260129.21.8e-40201201100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasnv+kll ++p ++r da+ +++yeA+ar+rdPvyG+v+ i++lqqq+ +l+ael
  XP_022770304.1  20 PCGACKFLRRKCVPGCIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVANIFALQQQVVNLQAEL 114
                     7***********************9989******************************************************************* PP

          DUF260  95 allkee 100
                     ++l+++
  XP_022770304.1 115 SYLQAH 120
                     *99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MSSNPSSSGG VGSCSSGGGP CGACKFLRRK CVPGCIFAPY FDSEQGAAHF AAVHKVFGAS  60
NVSKLLLHIP VHKRLDAVVT ICYEAQARLR DPVYGCVANI FALQQQVVNL QAELSYLQAH  120
LATLELPSPS PPPPPLMALS PLSISDLPSA SSVPATYDLS SLFDPMVQPS WAMQQRQIDP  180
RQFGGSGSSS STGSGDLQAS ARELHHRQGS PQLPCTETSP SPSLSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45420.12e-80LBD family protein