PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022770327.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 261aa    MW: 30380.4 Da    PI: 10.2269
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022770327.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.11.1e-28108157251
                     ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF   2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                     rien   rqvtf kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s
  XP_022770327.1 108 RIENAASRQVTFFKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFAS 157
                     8***********************************************86 PP
2K-box74.53e-25177256887
           K-box   8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekel 87 
                       +e+++++l++e+a++ k+ie Lq + R+llGe+L+s++++eLqq++qqLe+s++++R++K+++++eqie+l++k    
  XP_022770327.1 177 TPTEQNMQHLRTESANMVKKIELLQVSRRKLLGECLGSCTVEELQQIQQQLERSVSRVRARKTQVFKEQIEQLKEKVSLE 256
                     37899**********************************************************************98654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MISFFTFTFL KLCFKCLLDF WCNQNSLQFI QKNILSCCVL FSLKQSNQTT AYPSVYSSWL  60
TNLYYFSVFL ASLSSNIVKK KKKRAPSVLL VFLLEGAEMV RGKTQMRRIE NAASRQVTFF  120
KRRNGLLKKA FELSVLCDAE VALIIFSPRG KLYEFASSSM QETIERYMRH TKDNRTTPTE  180
QNMQHLRTES ANMVKKIELL QVSRRKLLGE CLGSCTVEEL QQIQQQLERS VSRVRARKTQ  240
VFKEQIEQLK EKVSLEAEQS Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.11e-75MIKC_MADS family protein