PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022770361.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 811aa    MW: 88092 Da    PI: 6.1855
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022770361.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.38.5e-21116171156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++eLe+lF+++++p++++r eL+k+l L++rqVk+WFqNrR+++k
  XP_022770361.1 116 KKRYHRHTPQQIQELETLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 171
                     688999***********************************************999 PP
2START198.13.8e-623215421206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEEC CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetlakaetlevis 86 
                     ela++a++elvk+a+ +ep+W +s     e++n+de++++f+++ +     + +ea+r++gvv+ ++  lve+l+d+  q   + +  +t++vis
  XP_022770361.1 321 ELALAAMDELVKMAQTDEPLWIRSLeggrEILNQDEYVRTFTSGIGmkpsgFVTEASRETGVVIINSLALVETLMDSVSQLYVYPITTSTTDVIS 415
                     5899*************************************99999********************************988888889******** PP

                     TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--S CS
           START  87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkg 174
                     sg      galqlm aelq+lsplvp R++ f+R+++q+ +g+w++vdvS+d  ++ p  + +v +++lpSg+++++++ng+skv+wve +++++
  XP_022770361.1 416 SGmggtrnGALQLMHAELQVLSPLVPvREVNFLRFCKQHAEGVWAVVDVSIDTIRETPGAPTFVNCRRLPSGCVVQDMPNGYSKVIWVECAEYDE 510
                     *********************************************************************************************** PP

                     SXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 175 rlphwllrslvksglaegaktwvatlqrqcek 206
                     +++h+l+r+l++sg+ +ga++wvatlqrqce+
  XP_022770361.1 511 SQVHQLYRPLLRSGMGFGAQRWVATLQRQCEC 542
                     ******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 811 aa     Download sequence    
MSFGGFLDNS SGGGLGGARI GTDITYSNDM PTGAIAQPRL VSPSLPKSMF NSPGLSLALQ  60
QPNIDNHGDG TRMGENFEGS VGRRSREEEH ESRSGSDNMD GASGDDQDAA DNPPRKKRYH  120
RHTPQQIQEL ETLFKECPHP DEKQRLELSK RLCLETRQVK FWFQNRRTQM KTQLERHENN  180
LLRQENDKLR AENMSIRDAM RNPICTNCGG PAIIGDISLE EQHLRIENAR LKDELDRVCA  240
LAGKFLGRPV SALVASMPNS SLELGVGSNG YGGLSTVATT LPLGHDFGDG IASALPVIPP  300
NRPTTGVTGL DRSVERSMFL ELALAAMDEL VKMAQTDEPL WIRSLEGGRE ILNQDEYVRT  360
FTSGIGMKPS GFVTEASRET GVVIINSLAL VETLMDSVSQ LYVYPITTST TDVISSGMGG  420
TRNGALQLMH AELQVLSPLV PVREVNFLRF CKQHAEGVWA VVDVSIDTIR ETPGAPTFVN  480
CRRLPSGCVV QDMPNGYSKV IWVECAEYDE SQVHQLYRPL LRSGMGFGAQ RWVATLQRQC  540
ECLAILMSSA VHTRDHTAIT ASGRRSMLKL AQRMTDNFCA GVCASTVHKW NKLNAGNVGE  600
DVRVMTRKSV DDPGEPPGIV LSAATSVWLP VSPQRLFDFL RDERLRSEWD ILSNGGPMQE  660
MAHIAKGQDH GNCVSLLRAS AMNANQSSML ILQETCIDAA GSLVVYAPVD IPAMHVVMNG  720
GDSAYVALLP SGFAIVPDGP GSRGPISNGH INVNGGAGES HRVGGSLLTV AFQILVNSLP  780
TAKLTLESVE TVNNLISCTV QKIKAALHCE S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein