PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022770494.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB_related
Protein Properties Length: 346aa    MW: 37887.7 Da    PI: 8.1058
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022770494.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.31.7e-1375119147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
   XP_022770494.1  75 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 119
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MVSVNPTPIQ GFYFFDPMNM GLPGLNSMPP ANTVASPHPP PAVSSMSTSC AGNTMAYSED  60
PNKKIRKPYT ITKSRESWTE QEHDKFLEAL QLFDRDWKKI EAFVGSKTVI QIRSHAQKYF  120
LKVQKNGTSE HVPPPRPKRK AAHPYPQKAP KNASVVPQVA GPFQSSSALL ESGYTYGIDS  180
SSMLGNPVPT AALSSWGYNS APPVSVPQVT KDEAVLAGPT IVHNSCYSSS NESTPRTWSF  240
GETIDQGDHG KQSRVMPDFA QVYGFIGSIF DPSASGHLQK LKQMDPINLE TVVLLMRNLS  300
VNLTSPEFED HRRLLSTYEA ESECVKLGSS YNDIHTHKSA SAVPTA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01280.11e-101MYB_related family protein