PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022770593.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 613aa MW: 67955.9 Da PI: 6.6349

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022770593.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.5	5.1e-13	444	490	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI++Lq XP_022770593.1 444 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYINELQ 490 799*********************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 613 aa Download sequence
MKIEVGMGGG AWNDEDKAMV AAVLGTRAFD YLISSSVSNE NLLTTISSDE NLQNKLSDLV 60 DRPNASNFSW NYAIFWQISR SKSSDWVLGW GDGCCREPKE GEESEATRIL NQRLEDENQQ 120 RMRKRVLQKL HNLFGGSDED NYALGLDRVT DTEMFFLASM YFSFPRGEGG PGKCFAFGKH 180 VWISDALKSG SDYCVRSFLT KSAGVQTIVL VPTDVGVVEL GSVRSVPESL ELLQSIRSSF 240 SSNSAFSRAK QMAVAIPMAN EKNDENTHFS NFGSVERVES IPKIFGQDLN NTTHGHSNCR 300 EKLAVRKMED RSTWGTLANG GRLSFSSQNG LHGSGWPHVH GLKQGSPTEI YGSQNTSNNF 360 QELVNGAKEE FRLNHCQSQK PAQMQIDFSG ATSRPSAITR PLSAESEHSD VEAPCKEEKP 420 SAADERRPRK RGRKPANGRE EPLNHVEAER QRREKLNQRF YALRAVVPNI SKMDKASLLG 480 DAIAYINELQ AKLKVMEAER EKFGSSSRDF AGLDPNLNAE NHTRALDIDV QAVNDEVVVR 540 VGCPLDSHPA SRVIQAFKGA EINVLESKLV AADDTVFHTF VIKSQGSEQL TREKLIAAFS 600 RESNSLQPLS SLR

Sequence ? help Back to Top

Protein Sequence Length: 613 aa Download sequence

MKIEVGMGGG AWNDEDKAMV AAVLGTRAFD YLISSSVSNE NLLTTISSDE NLQNKLSDLV  60
DRPNASNFSW NYAIFWQISR SKSSDWVLGW GDGCCREPKE GEESEATRIL NQRLEDENQQ  120
RMRKRVLQKL HNLFGGSDED NYALGLDRVT DTEMFFLASM YFSFPRGEGG PGKCFAFGKH  180
VWISDALKSG SDYCVRSFLT KSAGVQTIVL VPTDVGVVEL GSVRSVPESL ELLQSIRSSF  240
SSNSAFSRAK QMAVAIPMAN EKNDENTHFS NFGSVERVES IPKIFGQDLN NTTHGHSNCR  300
EKLAVRKMED RSTWGTLANG GRLSFSSQNG LHGSGWPHVH GLKQGSPTEI YGSQNTSNNF  360
QELVNGAKEE FRLNHCQSQK PAQMQIDFSG ATSRPSAITR PLSAESEHSD VEAPCKEEKP  420
SAADERRPRK RGRKPANGRE EPLNHVEAER QRREKLNQRF YALRAVVPNI SKMDKASLLG  480
DAIAYINELQ AKLKVMEAER EKFGSSSRDF AGLDPNLNAE NHTRALDIDV QAVNDEVVVR  540
VGCPLDSHPA SRVIQAFKGA EINVLESKLV AADDTVFHTF VIKSQGSEQL TREKLIAAFS  600
RESNSLQPLS SLR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	426	434	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	0.0	bHLH family protein