PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022770597.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 652aa MW: 72495.8 Da PI: 8.0614

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022770597.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.5	1.2e-23	76	176	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+k+lt sd++++g +++ +k+a+e +++ + +++lt +d++g +W++k+i+r++++r++lt+GW+ Fv ++L +gD +vF + +++ XP_022770597.1 76 FCKILTASDTSTHGGFSVLRKHATESlppldMSQATPTQELTAKDLHGHEWRFKHIFRGQPRRHLLTTGWSTFVTNKRLVAGDAFVFL--RGDNG 168 99*******************9999555566679********************************************..34899 PP ..EEEEE- CS B3 91 elvvkvfr 98 el+v+v+r XP_022770597.1 169 ELRVGVRR 176 99**98 PP
2	Auxin_resp	105.7	5.3e-35	202	281	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aaha++t++ F v+Y+Pr+ s+F++ v+k+++a+++++svGmRfkm+fe+e+s+err++Gt+vgv d++p +W++SkWrsLk XP_022770597.1 202 AAHAVTTHTLFVVYYKPRT--SQFIIGVNKYLEAINNRFSVGMRFKMRFEGEESPERRFTGTIVGVGDISP-HWSESKWRSLK 281 79**************6..9*******************************************99.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 652 aa Download sequence
MEQLEASTNQ ELNNQAPLFN LPSKILCRVL HFQLLAEKET DEVYAQITLQ PEVDQSEPTS 60 PDPCPTEAPK MTVHSFCKIL TASDTSTHGG FSVLRKHATE SLPPLDMSQA TPTQELTAKD 120 LHGHEWRFKH IFRGQPRRHL LTTGWSTFVT NKRLVAGDAF VFLRGDNGEL RVGVRRLARQ 180 QSTMPSSVIS SQSMHLGVLA TAAHAVTTHT LFVVYYKPRT SQFIIGVNKY LEAINNRFSV 240 GMRFKMRFEG EESPERRFTG TIVGVGDISP HWSESKWRSL KIQWDEPATI QRPERVSPWE 300 IEPFVASASI NLVQPAVKSK RPRPVDIPAS EITTNSAGSA FWCRGSTQSH QLTRGGSTPD 360 VQSSESKVMW SMRQKEIDNS LINSSGGYNP RTRPENAWPP SPHMNVSLNL FPDSIDDSNK 420 TGTPQTVLAG YASSVQSRQS KGLMHDQVEK GKKSKISTGC RLFGFNLTDS TSASVPPDKE 480 QASTTVDYNG VRGLIPAASH IDQNPETLKS SKEQRQVASE TSTKEKQAKQ GAATSMRTRT 540 KVHMQGIAVG RAVDLTVLKG YDDLVNELEK MFDIKGELCP HGKWSVIFTD DEGDMMLLGD 600 DPWVEFCKMV RKIFIYSSEE VKKISARCKF PASSLEGEGT VVSLDSEHRS ET

Sequence ? help Back to Top

Protein Sequence Length: 652 aa Download sequence

MEQLEASTNQ ELNNQAPLFN LPSKILCRVL HFQLLAEKET DEVYAQITLQ PEVDQSEPTS  60
PDPCPTEAPK MTVHSFCKIL TASDTSTHGG FSVLRKHATE SLPPLDMSQA TPTQELTAKD  120
LHGHEWRFKH IFRGQPRRHL LTTGWSTFVT NKRLVAGDAF VFLRGDNGEL RVGVRRLARQ  180
QSTMPSSVIS SQSMHLGVLA TAAHAVTTHT LFVVYYKPRT SQFIIGVNKY LEAINNRFSV  240
GMRFKMRFEG EESPERRFTG TIVGVGDISP HWSESKWRSL KIQWDEPATI QRPERVSPWE  300
IEPFVASASI NLVQPAVKSK RPRPVDIPAS EITTNSAGSA FWCRGSTQSH QLTRGGSTPD  360
VQSSESKVMW SMRQKEIDNS LINSSGGYNP RTRPENAWPP SPHMNVSLNL FPDSIDDSNK  420
TGTPQTVLAG YASSVQSRQS KGLMHDQVEK GKKSKISTGC RLFGFNLTDS TSASVPPDKE  480
QASTTVDYNG VRGLIPAASH IDQNPETLKS SKEQRQVASE TSTKEKQAKQ GAATSMRTRT  540
KVHMQGIAVG RAVDLTVLKG YDDLVNELEK MFDIKGELCP HGKWSVIFTD DEGDMMLLGD  600
DPWVEFCKMV RKIFIYSSEE VKKISARCKF PASSLEGEGT VVSLDSEHRS ET

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	320	324	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61830.1	0.0	ARF family protein