PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022770628.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 238aa    MW: 27237.4 Da    PI: 4.8758
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022770628.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.23.2e-193084256
                    T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    ++R++f++eq++ Le +Fe+++ +   ++ + A++lgL+ rqV +WFqN+Ra++k
  XP_022770628.1 30 KNRRRFSDEQIKSLELMFESESRLEPPKKLQVARELGLQPRQVAIWFQNKRARWK 84
                    89****************************************************9 PP
2HD-ZIP_I/II117.11e-3731122293
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     ++rr+s+eq+k+LE +Fe+e++Lep +K ++areLglqprqva+WFqn+RAR+ktkqlE+dy  L+++y +l+++ e+L+ke+++L  +l++
  XP_022770628.1  31 NRRRFSDEQIKSLELMFESESRLEPPKKLQVARELGLQPRQVAIWFQNKRARWKTKQLERDYGILQANYSNLASKFENLKKEKQALVIQLQK 122
                     689***********************************************************************************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MLDGGEYTQG MAEPFSSMTE VTTTKKKKNK NRRRFSDEQI KSLELMFESE SRLEPPKKLQ  60
VARELGLQPR QVAIWFQNKR ARWKTKQLER DYGILQANYS NLASKFENLK KEKQALVIQL  120
QKLNDLLKKP KDEGKCCGQV TTMNSIDGDS DKGEAVKSDS EGQLSLSMER SEHALGVLSD  180
DDSAMKTDYF RLEEEANLVS MVEPADGSLT SSEDWRSFDS DGLFDQSSSG YQWWDFWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.18e-73HD-ZIP family protein