PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022770650.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 760aa MW: 83673.2 Da PI: 6.1961

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022770650.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49	1.4e-15	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT++E+ ++++a k++G W +I +++g ++t+ q++s+ qk+ XP_022770650.1 24 RERWTEDEHNRFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 760 aa Download sequence
MDTYSSGEEL VFKTRKPYTI TKQRERWTED EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFS KVIWCLLAYA YIQFDYRQIF HYQLEKEALA KGITIGQALD IEIPPPRPKR 120 KPSNPYPRKT GAATSAQVGS KDGKSEMSIS LRCKKVLDLE KEPLPERPKG DEKPRNLKEN 180 QDESCSEGFT LLHEANCSSV SSANKNSISS SAPVRNSCTF REFVPSLKET IQDNGTNKAS 240 NLENSCMSHD KSAQGQKKDY LDGALHTDEM QATQNYPRHV AVHVLDGSLG TCAQNPSQDT 300 HFQDSVFHPM GDVHGQPNMF ANPAASATTE HQNNEPRSPH QAFPTFHTPF MHVRPNQEDY 360 RSFLHVSSNF SSLIVSTLLQ NPAAHAAASF AATFCPYANV ESSVDSPACS QGGFPSGQMN 420 SAPSMAAIAA ATVAAATAWW AAHGLLPVCA PLHAGFNCAP ASTAADPPME NGQAPTAKTE 480 RKDNTDQDFS MQDQQLDPEY SEGLQGQHSA SRSPTSSSSD CEESGDAKVN TEVKADDDEK 540 AGAVTEPQDA NKTKNRKQVD RSSCGSNTPS SSEVETDMLE KHEKDNEDSK GADANHPQAE 600 CSNRRSRSIS NLSDSWKEVS EEGRLAFQAL FSRDVLPQSF SPPHDDKNKA QQKENVGEDE 660 RNTDEKDREA STLDLNSKAW GSCSDHQEVE KNALSRGESI VEESLLTIGL GHAKLKARRT 720 GFKPYKRCSV EAMENRVMNT GSQGEEKGPK RIRLGGEAST

Sequence ? help Back to Top

Protein Sequence Length: 760 aa Download sequence

MDTYSSGEEL VFKTRKPYTI TKQRERWTED EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFS KVIWCLLAYA YIQFDYRQIF HYQLEKEALA KGITIGQALD IEIPPPRPKR  120
KPSNPYPRKT GAATSAQVGS KDGKSEMSIS LRCKKVLDLE KEPLPERPKG DEKPRNLKEN  180
QDESCSEGFT LLHEANCSSV SSANKNSISS SAPVRNSCTF REFVPSLKET IQDNGTNKAS  240
NLENSCMSHD KSAQGQKKDY LDGALHTDEM QATQNYPRHV AVHVLDGSLG TCAQNPSQDT  300
HFQDSVFHPM GDVHGQPNMF ANPAASATTE HQNNEPRSPH QAFPTFHTPF MHVRPNQEDY  360
RSFLHVSSNF SSLIVSTLLQ NPAAHAAASF AATFCPYANV ESSVDSPACS QGGFPSGQMN  420
SAPSMAAIAA ATVAAATAWW AAHGLLPVCA PLHAGFNCAP ASTAADPPME NGQAPTAKTE  480
RKDNTDQDFS MQDQQLDPEY SEGLQGQHSA SRSPTSSSSD CEESGDAKVN TEVKADDDEK  540
AGAVTEPQDA NKTKNRKQVD RSSCGSNTPS SSEVETDMLE KHEKDNEDSK GADANHPQAE  600
CSNRRSRSIS NLSDSWKEVS EEGRLAFQAL FSRDVLPQSF SPPHDDKNKA QQKENVGEDE  660
RNTDEKDREA STLDLNSKAW GSCSDHQEVE KNALSRGESI VEESLLTIGL GHAKLKARRT  720
GFKPYKRCSV EAMENRVMNT GSQGEEKGPK RIRLGGEAST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.3	1e-130	MYB_related family protein