PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022770652.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 738aa MW: 80836.9 Da PI: 6.1496

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022770652.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.1	1.3e-15	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT++E+ ++++a k++G W +I +++g ++t+ q++s+ qk+ XP_022770652.1 24 RERWTEDEHNRFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 738 aa Download sequence
MDTYSSGEEL VFKTRKPYTI TKQRERWTED EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFS KLEKEALAKG ITIGQALDIE IPPPRPKRKP SNPYPRKTGA ATSAQVGSKD 120 GKSEMSISLR CKKVLDLEKE PLPERPKGDE KPRNLKENQD ESCSEGFTLL HEANCSSVSS 180 ANKNSISSSA PVRNSCTFRE FVPSLKETIQ DNGTNKASNL ENSCMSHDKS AQGQKKDYLD 240 GALHTDEMQA TQNYPRHVAV HVLDGSLGTC AQNPSQDTHF QDSVFHPMGD VHGQPNMFAN 300 PAASATTEHQ NNEPRSPHQA FPTFHTPFMH VRPNQEDYRS FLHVSSNFSS LIVSTLLQNP 360 AAHAAASFAA TFCPYANVES SVDSPACSQG GFPSGQMNSA PSMAAIAAAT VAAATAWWAA 420 HGLLPVCAPL HAGFNCAPAS TAADPPMENG QAPTAKTERK DNTDQDFSMQ DQQLDPEYSE 480 GLQGQHSASR SPTSSSSDCE ESGDAKVNTE VKADDDEKAG AVTEPQDANK TKNRKQVDRS 540 SCGSNTPSSS EVETDMLEKH EKDNEDSKGA DANHPQAECS NRRSRSISNL SDSWKEVSEE 600 GRLAFQALFS RDVLPQSFSP PHDDKNKAQQ KENVGEDERN TDEKDREAST LDLNSKAWGS 660 CSDHQEVEKN ALSRGESIVE ESLLTIGLGH AKLKARRTGF KPYKRCSVEA MENRVMNTGS 720 QGEEKGPKRI RLGGEAST

Sequence ? help Back to Top

Protein Sequence Length: 738 aa Download sequence

MDTYSSGEEL VFKTRKPYTI TKQRERWTED EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFS KLEKEALAKG ITIGQALDIE IPPPRPKRKP SNPYPRKTGA ATSAQVGSKD  120
GKSEMSISLR CKKVLDLEKE PLPERPKGDE KPRNLKENQD ESCSEGFTLL HEANCSSVSS  180
ANKNSISSSA PVRNSCTFRE FVPSLKETIQ DNGTNKASNL ENSCMSHDKS AQGQKKDYLD  240
GALHTDEMQA TQNYPRHVAV HVLDGSLGTC AQNPSQDTHF QDSVFHPMGD VHGQPNMFAN  300
PAASATTEHQ NNEPRSPHQA FPTFHTPFMH VRPNQEDYRS FLHVSSNFSS LIVSTLLQNP  360
AAHAAASFAA TFCPYANVES SVDSPACSQG GFPSGQMNSA PSMAAIAAAT VAAATAWWAA  420
HGLLPVCAPL HAGFNCAPAS TAADPPMENG QAPTAKTERK DNTDQDFSMQ DQQLDPEYSE  480
GLQGQHSASR SPTSSSSDCE ESGDAKVNTE VKADDDEKAG AVTEPQDANK TKNRKQVDRS  540
SCGSNTPSSS EVETDMLEKH EKDNEDSKGA DANHPQAECS NRRSRSISNL SDSWKEVSEE  600
GRLAFQALFS RDVLPQSFSP PHDDKNKAQQ KENVGEDERN TDEKDREAST LDLNSKAWGS  660
CSDHQEVEKN ALSRGESIVE ESLLTIGLGH AKLKARRTGF KPYKRCSVEA MENRVMNTGS  720
QGEEKGPKRI RLGGEAST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.3	1e-136	MYB_related family protein