PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022770702.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 457aa MW: 50970.5 Da PI: 7.1106

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022770702.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.3	3e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl XP_022770702.1 14 KGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	47.3	4.9e-15	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +++eE+ l+v++++ lG++ W+ Ia+ ++ gRt++++k+ w++ XP_022770702.1 67 RGTFSQEEENLIVELHAALGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 899*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQEEENLIVE LHAALGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG 120 IDPVTHKPLS EVENGEDKCQ PTNSMDMVSG ASSELNLNAD NVKPGAALHE QRPTSVTAQG 180 YQLEMEGSSS SKTMNSSNNS SNNRNLITST ASKDFFLDRF STTHHESTTT NGHPSDLVGL 240 LPIQQLNYAS NARLSSTSNP TLWFTQTSKA FDINSEFSST SMSTLLPPLT SSFLSAPMGF 300 KQSVTVSSDS PSMASFTVNG SRYWETVASA NNSNSGSRTE LQSNSSFYEN NSFSWGLADC 360 STPEKEAPIH LMESQAEEIK WPEYLNNPLV MAAALQNQTP QSLYNIEIKS ETHFLTNNNS 420 SSNCMWPHNQ QQQQEPLQNS DTYAKDIQRL TAAYGNI

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY  60
LRPDLKRGTF SQEEENLIVE LHAALGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG  120
IDPVTHKPLS EVENGEDKCQ PTNSMDMVSG ASSELNLNAD NVKPGAALHE QRPTSVTAQG  180
YQLEMEGSSS SKTMNSSNNS SNNRNLITST ASKDFFLDRF STTHHESTTT NGHPSDLVGL  240
LPIQQLNYAS NARLSSTSNP TLWFTQTSKA FDINSEFSST SMSTLLPPLT SSFLSAPMGF  300
KQSVTVSSDS PSMASFTVNG SRYWETVASA NNSNSGSRTE LQSNSSFYEN NSFSWGLADC  360
STPEKEAPIH LMESQAEEIK WPEYLNNPLV MAAALQNQTP QSLYNIEIKS ETHFLTNNNS  420
SSNCMWPHNQ QQQQEPLQNS DTYAKDIQRL TAAYGNI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	118	LKKKLRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01680.3	1e-93	MYB family protein