PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022771095.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 688aa MW: 76739.6 Da PI: 4.9611

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022771095.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.8	2.3e-14	473	519	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ XP_022771095.1 473 NHVLAERRRREKLNERFVILRSLVPFV-----TKMDKASILGDTIEYVKQLR 519 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 688 aa Download sequence
MAVPPSSRLQ NMLQAAVQSV QWTYSLFWQI CPQQRILIWS DGYYNGAIKT RKTVQPMEVS 60 AEEASLQRSQ QLRELYESLS AGETNQPARR PCAALSPEDL TESEWFYLMC VSFSFPPGVG 120 LPGKAYARRQ HVWLTGANEV DSKTFSRAVL AKSACIQTVL CIPLLDGVLE LGTTEKVQED 180 LGLVQHVKTF FNDSHNPIPP PPKPALSEHS TSNPATSSDH TRFHSPSIPP TYAAADPPVN 240 ANQEDDDDED DEEEEEDDGE EPESDSAETG RNIREVPTQN TQAVAAAAEP SELMQMEMSE 300 DIKLGSPDDA SNNLDSDFHM LAVSQSGNPA EQQRRADSFK AESSRRWQTL QEPISNSLQP 360 PSSGPQPLDE LSQEDTHYSQ TVSTILQGQS TRWAESSSTG YSTQSAFAKW TTRSDYHLHV 420 SVEGTSQWLL KYILLSVPFL HSKYRDENSP KSRDTDAAAR FRRGIPQDEL SANHVLAERR 480 RREKLNERFV ILRSLVPFVT KMDKASILGD TIEYVKQLRK KIQELETLNR QMEADNERSR 540 SADSMQRTSS LKEQRSGVTV SERARSLGSG PPGPDKRKMR IVEGSGGVAK PKAVESPQQQ 600 TAETSVEVSI IESDALLELQ CGYREGLLLD IMQMLREQLR IEITAVQSSV NNGVFVAELR 660 AKVKDNVKGK KVSITEVKKA IYQVIPQF

Sequence ? help Back to Top

Protein Sequence Length: 688 aa Download sequence

MAVPPSSRLQ NMLQAAVQSV QWTYSLFWQI CPQQRILIWS DGYYNGAIKT RKTVQPMEVS  60
AEEASLQRSQ QLRELYESLS AGETNQPARR PCAALSPEDL TESEWFYLMC VSFSFPPGVG  120
LPGKAYARRQ HVWLTGANEV DSKTFSRAVL AKSACIQTVL CIPLLDGVLE LGTTEKVQED  180
LGLVQHVKTF FNDSHNPIPP PPKPALSEHS TSNPATSSDH TRFHSPSIPP TYAAADPPVN  240
ANQEDDDDED DEEEEEDDGE EPESDSAETG RNIREVPTQN TQAVAAAAEP SELMQMEMSE  300
DIKLGSPDDA SNNLDSDFHM LAVSQSGNPA EQQRRADSFK AESSRRWQTL QEPISNSLQP  360
PSSGPQPLDE LSQEDTHYSQ TVSTILQGQS TRWAESSSTG YSTQSAFAKW TTRSDYHLHV  420
SVEGTSQWLL KYILLSVPFL HSKYRDENSP KSRDTDAAAR FRRGIPQDEL SANHVLAERR  480
RREKLNERFV ILRSLVPFVT KMDKASILGD TIEYVKQLRK KIQELETLNR QMEADNERSR  540
SADSMQRTSS LKEQRSGVTV SERARSLGSG PPGPDKRKMR IVEGSGGVAK PKAVESPQQQ  600
TAETSVEVSI IESDALLELQ CGYREGLLLD IMQMLREQLR IEITAVQSSV NNGVFVAELR  660
AKVKDNVKGK KVSITEVKKA IYQVIPQF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	478	483	ERRRRE
2	479	484	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	1e-104	bHLH family protein