PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022771240.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 216aa    MW: 23689 Da    PI: 7.694
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022771240.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260127.37.1e-40271281101
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkCa+dC++apyf++eq p++fa++hk+FGasnv+kll ++p ++r +a+ +++yeA+ar+rdPvyG+v++i++lqqq+++l+++l
  XP_022771240.1  27 PCGACKFLRRKCASDCIFAPYFCSEQgPARFAAIHKVFGASNVSKLLLHIPAHDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVACLQTQL 121
                     7*************************99******************************************************************* PP

          DUF260  95 allkeel 101
                      ++k+++
  XP_022771240.1 122 MQVKAQI 128
                     9999875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MDVYICLGEV SSMASSGSGT ATGTSSPCGA CKFLRRKCAS DCIFAPYFCS EQGPARFAAI  60
HKVFGASNVS KLLLHIPAHD RCEAVVTIAY EAQARIRDPV YGCVAHIFAL QQQVACLQTQ  120
LMQVKAQINA MNSHNIQSQW HGNLSGVPSI PTYPSYINPI SPQSSLESIE LNSADSMNMQ  180
EIQSREEFSF QGYPKKRPYN SDLGELQALA LRMMRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42430.11e-75LBD family protein