PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022771689.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 526aa    MW: 58928.9 Da    PI: 5.6998
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022771689.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS464.46.5e-1421565261374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+++L++cA+avs++dl +aq+l+ +l+ ++s +g+p+qRl ay++e+L arla+s+s++ykal+++e +   s++ l+++++++ev+P++kf++
  XP_022771689.1 156 LIQVLVSCAKAVSDNDLLMAQWLMDELRRMVSVSGEPIQRLGAYMLEGLVARLASSGSSIYKALRCKEPA---SADLLSYMHILYEVCPYFKFGY 247
                     6899*****************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN aI ea++ e+rvHiiDf+i qG QW++L+qa+a+Rp+gpp++RiTg++++ s   +   l+ +g+rL+k+Ae+++vpf+f++ va +  +
  XP_022771689.1 248 MSANGAIAEAMKDEDRVHIIDFQIAQGSQWITLIQAFAARPGGPPHIRITGIDDSISAyaRGGDLNIVGKRLSKLAERFKVPFKFHA-VAMSGCE 341
                     ******************************************************877788999************************.6888999 PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++ e+Lrv+pgEalaVn++++lh+++desvs+e+ rd++L+lvkslsPkvv++veqe+++ns++F+ rfle+l+yy+a+f+s++++lpre++eri
  XP_022771689.1 342 VQQEHLRVQPGEALAVNFAFMLHHMPDESVSTENLRDRLLRLVKSLSPKVVTLVEQESNTNSAPFFPRFLETLNYYTAMFESIDVTLPREHKERI 436
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +vE+++l+r++vn++aceg er+erhe l+kWr+r+++aGF+p+pls+ +++++k+ll+++ +  yr+ee++g+l+lgW++r Lv+++aW+
  XP_022771689.1 437 NVEQHCLARDVVNIIACEGPERVERHELLGKWRSRFRMAGFTPYPLSSLVNATIKTLLENYCD-KYRLEERDGALYLGWMNRDLVAACAWK 526
                     *************************************************************95.5*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 526 aa     Download sequence    
MASGLYHQVK QEVEPYCFPQ FPTIDCSLCY SDGSHGSHFS LKNSHEHYCT LESSSANGSC  60
TFYNSSSTVS FSPNGSPMSQ QESQSYPSDL HHSPDNTYGS PLSGSCITDD VSDLRDKLRE  120
LETVMLGPDS DFIDGTTSPE MDGWRLVMDA ISRGDLIQVL VSCAKAVSDN DLLMAQWLMD  180
ELRRMVSVSG EPIQRLGAYM LEGLVARLAS SGSSIYKALR CKEPASADLL SYMHILYEVC  240
PYFKFGYMSA NGAIAEAMKD EDRVHIIDFQ IAQGSQWITL IQAFAARPGG PPHIRITGID  300
DSISAYARGG DLNIVGKRLS KLAERFKVPF KFHAVAMSGC EVQQEHLRVQ PGEALAVNFA  360
FMLHHMPDES VSTENLRDRL LRLVKSLSPK VVTLVEQESN TNSAPFFPRF LETLNYYTAM  420
FESIDVTLPR EHKERINVEQ HCLARDVVNI IACEGPERVE RHELLGKWRS RFRMAGFTPY  480
PLSSLVNATI KTLLENYCDK YRLEERDGAL YLGWMNRDLV AACAWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein