PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022771828.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 255aa MW: 29114.1 Da PI: 8.936

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022771828.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	99.7	1.1e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_022771828.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP
2	K-box	92.6	6.6e-31	94	184	10	100
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +++ es+ +e++kLk+++e Lq++qR llGe+L++L+ keL+qLe+qLe+slk++Rs+K++++l+q+++lq+ke++l e+n+aL+ kl+e XP_022771828.1 94 PAKELESSFREYQKLKARYEALQQTQRYLLGEELGPLNSKELEQLEHQLESSLKNVRSTKTQYMLDQLSDLQNKEQMLMEANRALSIKLNE 184 567789999****************************************************************************999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS 60 ARLICTYCRM ASGMHKTLER YQKCSYGAVE VSKPAKELES SFREYQKLKA RYEALQQTQR 120 YLLGEELGPL NSKELEQLEH QLESSLKNVR STKTQYMLDQ LSDLQNKEQM LMEANRALSI 180 KLNEISARNQ FQASWEGGEQ SVTYSNQQTQ SQGLFQPLEC NPTLQIGYDP VASNHIAAAT 240 THAQQVNGFI PGWTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15800.1	1e-113	MIKC_MADS family protein