PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022771829.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 245aa MW: 27973.7 Da PI: 8.823

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022771829.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	99.8	1e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_022771829.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP
2	K-box	92.1	9.8e-31	83	174	9	100
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +++ ++s+ +e++kLk+++e Lq++qR llGe+L++L+ keL+qLe+qLe+slk++Rs+K++++l+q+++lq+ke++l e+n+aL+ kl+e XP_022771829.1 83 PAKELEQSSFREYQKLKARYEALQQTQRYLLGEELGPLNSKELEQLEHQLESSLKNVRSTKTQYMLDQLSDLQNKEQMLMEANRALSIKLNE 174 5566678999****************************************************************************999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS 60 ASMHKTLERY QKCSYGAVEV SKPAKELEQS SFREYQKLKA RYEALQQTQR YLLGEELGPL 120 NSKELEQLEH QLESSLKNVR STKTQYMLDQ LSDLQNKEQM LMEANRALSI KLNEISARNQ 180 FQASWEGGEQ SVTYSNQQTQ SQGLFQPLEC NPTLQIGYDP VASNHIAAAT THAQQVNGFI 240 PGWTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15800.1	1e-115	MIKC_MADS family protein