PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022771929.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 606aa    MW: 65827.1 Da    PI: 5.4495
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022771929.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS445.63.4e-1362386001374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv++L++cAeav++++l+la+al++++  la +++ +m+++a+yf+eALa+r++r    +y    p+++ + +s++ l++   f+e++P+lkf+h
  XP_022771929.1 238 LVHTLMACAEAVQQDNLKLADALVNHIGLLAVSQAGAMRKVATYFAEALARRIYR----IY----PQDSLDPSSTDILQM--HFYETCPYLKFAH 322
                     689****************************************************....44....444433334555444..5************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +taNqaIlea++++++vH+iDf+++qG+QWpaL+qaLa Rp+gpp + +Tg+g+p+++++++l+++g++L++fAe++gv+f+f+ lva++l+dle
  XP_022771929.1 323 FTANQAILEAFATANTVHVIDFGLKQGMQWPALIQALALRPGGPPAFLLTGIGPPQPDNTDALQQVGRKLHQFAETIGVKFKFRGLVANSLADLE 417
                     *********************************************************************************************** PP

            GRAS 191 leeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +e+L++++   +a+aVn+v++lhrll++++ +e+    vL+ +k l+Pk+++ veqea+hn++ Flerf+eal+yys+lfdsle +  +  +++ 
  XP_022771929.1 418 PEMLEIRTaeVDAVAVNSVFELHRLLARPGGIEK----VLSSIKALKPKILTAVEQEANHNGPIFLERFTEALHYYSSLFDSLEGSGVAPPNQDL 508
                     *****99966779********************9....*********************************************888677779999 PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     ++++ +lgr+i+nvvaceg +r+erhetl +Wr r+e+aGF+pv+++++a++ +++ll++++ +dgyrvee++g+l+lgW++rpL+++SaW+
  XP_022771929.1 509 VMSELYLGRQICNVVACEGMDRVERHETLTQWRTRMETAGFSPVHFGSNAYNLVSMLLARFArGDGYRVEENNGCLTLGWHTRPLIATSAWQ 600
                     9******************************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 606 aa     Download sequence    
MKRKHQEICG ATGCGSGSGS KAESSSIGNT NRGKIWEEDQ DAGGMDELLA VLGYKVRSSD  60
MADVAQKLEQ LEMVMGTAQE DGISHLSSDT IHYNPSDLSG WVQSMLTELN NPATENLDPV  120
MANSDSNSSI LGQINHSGHS KPQHQQQIVS SIQSQVYNDD SEYDLRAIPG IAAYPPPKSE  180
SDSESTRKRM KTSIGSSGST GYGSSSSSPQ GIGVSGAVTE SSTRPVVLID SQETGVRLVH  240
TLMACAEAVQ QDNLKLADAL VNHIGLLAVS QAGAMRKVAT YFAEALARRI YRIYPQDSLD  300
PSSTDILQMH FYETCPYLKF AHFTANQAIL EAFATANTVH VIDFGLKQGM QWPALIQALA  360
LRPGGPPAFL LTGIGPPQPD NTDALQQVGR KLHQFAETIG VKFKFRGLVA NSLADLEPEM  420
LEIRTAEVDA VAVNSVFELH RLLARPGGIE KVLSSIKALK PKILTAVEQE ANHNGPIFLE  480
RFTEALHYYS SLFDSLEGSG VAPPNQDLVM SELYLGRQIC NVVACEGMDR VERHETLTQW  540
RTRMETAGFS PVHFGSNAYN LVSMLLARFA RGDGYRVEEN NGCLTLGWHT RPLIATSAWQ  600
LATTES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.10.0GRAS family protein