PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022772177.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 250aa MW: 28156.4 Da PI: 10.1742

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022772177.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.7	6.2e-19	35	80	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+teEd +l ++v+++G+++W++I+r++ gR++k+c++rw + XP_022772177.1 35 KGPWSTEEDRILTRLVARYGPRNWSLISRYIK-GRSGKSCRLRWCNQ 80 79***************************9.*********985 PP
2	Myb_DNA-binding	54.3	3.2e-17	89	131	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +++ Ede ++ a++++G++ W+tIar ++ gRt++ +k++w++ XP_022772177.1 89 PFSHAEDETILAAHARHGNR-WATIARLLP-GRTDNAVKNHWNST 131 7999**************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MEAMNRCSSS ISSSDTSSSQ SSFSARASNK AEKIKGPWST EEDRILTRLV ARYGPRNWSL 60 ISRYIKGRSG KSCRLRWCNQ LSPNVEHRPF SHAEDETILA AHARHGNRWA TIARLLPGRT 120 DNAVKNHWNS TLKRRAREGQ LQQQQQQQQQ QLLLHQQEQI IQSHHQQMVD GDSALGSAGL 180 MMDEEALTAL TLAPAGSVFG TNGSAVVAER RRREDRVSAG QFWDVMRDVI AREVREYMSL 240 TLSAETSGFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	209	214	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67300.1	1e-56	MYB family protein