PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022772236.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 218aa    MW: 23832.9 Da    PI: 8.1323
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022772236.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26089.73.7e-282104198
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C+vlr++C++ Cvl+  +     p++q +++ +++k+FG+s +l+l++++pe +r+++ +sl++eA+ r+ +Pv+Gavg++++++++++q+
  XP_022772236.1   2 SCNGCRVLRKGCSETCVLRSSLrwiesPEAQGNATLFLAKFFGRSDLLSLISSVPEYQRPALYQSLLFEACGRTVNPVNGAVGLLSSGNWHICQA 96 
                     6********************************************************************************************** PP

          DUF260  91 kaelallk 98 
                     ++e++l++
  XP_022772236.1  97 AVETVLQG 104
                     **998875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MSCNGCRVLR KGCSETCVLR SSLRWIESPE AQGNATLFLA KFFGRSDLLS LISSVPEYQR  60
PALYQSLLFE ACGRTVNPVN GAVGLLSSGN WHICQAAVET VLQGGALRPI PGILAGVWTP  120
SCDESSVLFC ANSCNFQSRY AQSKPLMTMM NENQSASDLS LSLTTKFGGG RRGSGSRYQE  180
ENKRAKTASF YSEESEITTF ESNGNEGRQE RKILNLFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37540.13e-69LBD family protein