PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022772250.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GRF

Protein Properties

Length: 617aa MW: 67028.6 Da PI: 8.2287

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022772250.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.1	1.8e-24	226	270	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e XP_022772250.1 226 DPEPGRCRRTDGKKWRCSRDAVADQKYCERHMNRGRHRSRKPVEG 270 79****************************************985 PP
2	QLQ	59.7	8.5e-21	156	192	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+++L++Q+l+yK++ an+P+P++Ll +i+k XP_022772250.1 156 GPFTPSQWMELERQALIYKCITANVPIPSNLLIPIRK 192 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MDFGVLGFDG FVGSETTAIT TTTTTGFTLA SDPETKQKWY GSGFLKQERS GNNEDDWMSS 60 KLAKIDDFSA SKATLLQQRN TLLRSNTSIF SDGQQQQQML SFSAPKSEAL SVDRSSQNLT 120 FPSFHLTLPA YTRNTGYNTG RFNGANMHGM LAGAGGPFTP SQWMELERQA LIYKCITANV 180 PIPSNLLIPI RKAFDSANFS SFPGGLLKPN TLGWGPFHLG FSNNTDPEPG RCRRTDGKKW 240 RCSRDAVADQ KYCERHMNRG RHRSRKPVEG QSGRSAAATT ATTTKLMPTF SSSSASVVGP 300 ISGSGESNSL AIAQQQFKNL QPGGASNLST AAPLNRLLMN KDTVGEKIHA TAPGLSMISP 360 TDDLKSKENP FLILKQQITY EQNSRNEFGV VSSDSLLNPS HKSSSLINCR NFGSSQDLTG 420 QETESQHSLR QFMDDWPKCQ SDRSTISWPE VDAQSDRTQL SISMAASDFM SSTSSPNNEK 480 VTLSPLRLSR EFDPIHMGLG VGSVINQPNH RQANWIPISW ETSMCGPLGE VLHSTNSSTA 540 DFKNSSALDL MTEGWDHSPR LGSSPTGVLQ KTTFGSLSNS SAGSSPRAEN NKTREGTRLC 600 DDLLGSTLVH SSSLPAV

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MDFGVLGFDG FVGSETTAIT TTTTTGFTLA SDPETKQKWY GSGFLKQERS GNNEDDWMSS  60
KLAKIDDFSA SKATLLQQRN TLLRSNTSIF SDGQQQQQML SFSAPKSEAL SVDRSSQNLT  120
FPSFHLTLPA YTRNTGYNTG RFNGANMHGM LAGAGGPFTP SQWMELERQA LIYKCITANV  180
PIPSNLLIPI RKAFDSANFS SFPGGLLKPN TLGWGPFHLG FSNNTDPEPG RCRRTDGKKW  240
RCSRDAVADQ KYCERHMNRG RHRSRKPVEG QSGRSAAATT ATTTKLMPTF SSSSASVVGP  300
ISGSGESNSL AIAQQQFKNL QPGGASNLST AAPLNRLLMN KDTVGEKIHA TAPGLSMISP  360
TDDLKSKENP FLILKQQITY EQNSRNEFGV VSSDSLLNPS HKSSSLINCR NFGSSQDLTG  420
QETESQHSLR QFMDDWPKCQ SDRSTISWPE VDAQSDRTQL SISMAASDFM SSTSSPNNEK  480
VTLSPLRLSR EFDPIHMGLG VGSVINQPNH RQANWIPISW ETSMCGPLGE VLHSTNSSTA  540
DFKNSSALDL MTEGWDHSPR LGSSPTGVLQ KTTFGSLSNS SAGSSPRAEN NKTREGTRLC  600
DDLLGSTLVH SSSLPAV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	1e-108	GRF family protein