PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022772254.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 344aa MW: 38518.2 Da PI: 7.4444

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022772254.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.2	3.3e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++q+G+g +W + ++++g++R++k+c++rw++yl XP_022772254.1 14 KGPWSPEEDAKLKAYIEQHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	34.8	3.7e-11	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_022772254.1 69 GGFSEEEDGIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE QHGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDGIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 QQKEQQSRRG SSLKQDKKSS GNGESMVPDH NQSPYWPQLP VLAAPIPYSS QEQCIDSQDS 180 MRRLLIKLGG RFCDDDHVIN DGTTLHHFPN DSSSADRQLY EQTVHMPSYS SSPMDALNNN 240 IGTQFVNSQY TVNGANLHML QGQSSFSSEL QEMARSNLQR LDGMEFIYGE GMVNNRAVNS 300 CESIGWGDTS SLVCPPVASE YEGIQQQGML QEYAFSELRY PGAQ

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE QHGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDGIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
QQKEQQSRRG SSLKQDKKSS GNGESMVPDH NQSPYWPQLP VLAAPIPYSS QEQCIDSQDS  180
MRRLLIKLGG RFCDDDHVIN DGTTLHHFPN DSSSADRQLY EQTVHMPSYS SSPMDALNNN  240
IGTQFVNSQY TVNGANLHML QGQSSFSSEL QEMARSNLQR LDGMEFIYGE GMVNNRAVNS  300
CESIGWGDTS SLVCPPVASE YEGIQQQGML QEYAFSELRY PGAQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	4e-77	MYB family protein