PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022772255.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 267aa    MW: 30005.9 Da    PI: 8.2768
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022772255.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.72.3e-19124178256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ +++k+q  +Le+ F+++++++ ++++ LA++l+L  rqV vWFqNrRa+ k
  XP_022772255.1 124 RKKLRLSKDQSAILEDNFKEHSTLNPKQKQALAEQLNLRPRQVEVWFQNRRARTK 178
                     788899***********************************************98 PP
2HD-ZIP_I/II124.64.7e-40124212190
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                     +kk+rlsk+q+++LE++F+e+++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l+een+rL+ke +eL+ +
  XP_022772255.1 124 RKKLRLSKDQSAILEDNFKEHSTLNPKQKQALAEQLNLRPRQVEVWFQNRRARTKLKQTEVDCESLKKCCETLTEENKRLQKELQELK-S 212
                     69*************************************************************************************9.4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MGFDDICKTG LVLDLGLGCL VKQEKFSQSD HQRKKKKLFL KNDHVFPSLT LGPSDDIYQS  60
ATKIDASKVH GESIDLHQQA SSLSAISSFS NSSVKKERDF GGEEVELERV SSRVSDEDEE  120
GSPRKKLRLS KDQSAILEDN FKEHSTLNPK QKQALAEQLN LRPRQVEVWF QNRRARTKLK  180
QTEVDCESLK KCCETLTEEN KRLQKELQEL KSLKLTASYY MKLPAATLTM CPSCERVGNG  240
GEGPSTGPFT MGQKSYFNPL THPSAAY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1173181RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.19e-60HD-ZIP family protein