PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022772275.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 226aa    MW: 25257.1 Da    PI: 8.8354
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022772275.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF86.11.9e-27959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+i+n + rqvtfskRr g++KKA+ELSv+Cdaeva+iifs tgkl+e++s
  XP_022772275.1  9 KKIDNVTARQVTFSKRRRGLFKKAQELSVMCDAEVALIIFSATGKLFEFAS 59
                    68***********************************************86 PP
2K-box43.31.6e-15941702298
           K-box  22 akLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                       L kei     ++R++ GedL+ L++ +LqqLe+ Le++l++i ++K e ++++i+ l k+  +l eenk+L++kl
  XP_022772275.1  94 VGLSKEIADKSLQLRQMRGEDLQGLNIDQLQQLEKMLESGLTRILETKGERIMNEISSLEKRGAQLLEENKQLKMKL 170
                     55666776666789************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MAREKIKIKK IDNVTARQVT FSKRRRGLFK KAQELSVMCD AEVALIIFSA TGKLFEFASS  60
SMRDILGRYN LQSNNLSKLD QPTLQLQLEN SNHVGLSKEI ADKSLQLRQM RGEDLQGLNI  120
DQLQQLEKML ESGLTRILET KGERIMNEIS SLEKRGAQLL EENKQLKMKL VSLCKGKRPV  180
LAYSDVGVQE EGMSSESVTN VCSFSSGPPV EDDSSDTSLK LGLPFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-102MIKC_MADS family protein