PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022772286.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 334aa MW: 37460.3 Da PI: 7.704

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022772286.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.5	2.1e-12	137	188	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r +h +Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i A++++k+L+ XP_022772286.1 137 QRITHITVERNRRKQMNEYLAVLRSLMPPS---YVQRGDQASIIGGAINFVKELE 188 699*************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MALEAVVYPQ DPFTYSCEDF YPVGGGAWGY DFCFQKEGKA LLGKFDNIEQ GKHHLHANWD 60 SSSTSVMQHA NEWDPYSSPE ANRTVDHSLP ANGFPPLMKP PGVAATAAAT TTTTTTNSRR 120 KRRRTRSSKN KEELENQRIT HITVERNRRK QMNEYLAVLR SLMPPSYVQR GDQASIIGGA 180 INFVKELEQL LQSLDAHKRT TQQPEHNGYS SPFAEFFTFP QFSTRATQCN NSQFMATEPM 240 AASNSVADIE VTMVETHANL KILTKKQPRQ LLKLVARLQS LRLTILHLNV TGVDGMALYS 300 ISVKVEEGCH LSTVDEIATA VNQMLHRIQE EAAF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	120	124	RKRRR
2	120	125	RKRRRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	5e-92	bHLH family protein