PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022772291.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 280aa    MW: 32125.6 Da    PI: 4.9496
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022772291.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.42.5e-1859112356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k+++++ eq+++Le++Fe ++++  e++ +LA +lgL+ rqV vW+qNrRa++k
  XP_022772291.1  59 KKRRLSIEQVKALEKYFEVENKLEPERKVKLAGELGLQPRQVAVWYQNRRARWK 112
                     5568999**********************************************9 PP
2HD-ZIP_I/II129.31.6e-4158150193
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     ekkrrls eqvk+LE+ Fe e+kLeperKv+la eLglqprqvavW+qnrRAR+ktkqlEkdy+ Lk++ydalk + ++Le+e+e+L++el+e
  XP_022772291.1  58 EKKRRLSIEQVKALEKYFEVENKLEPERKVKLAGELGLQPRQVAVWYQNRRARWKTKQLEKDYAILKASYDALKLDYNNLEQENETLTAELRE 150
                     69***************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MKRLSSSGSL DQDALISISP PKEEKNSKNK QFYSREFQAM LDGLEKEDSL EEAGQATEKK  60
RRLSIEQVKA LEKYFEVENK LEPERKVKLA GELGLQPRQV AVWYQNRRAR WKTKQLEKDY  120
AILKASYDAL KLDYNNLEQE NETLTAELRE LKAKLKEENS ESSHSVKEDS PKFSQQTKGH  180
DFCDDADNSN GIVKEEINVN AQLLISPSSS SSFQFNGSSS SSDSSNHQWF QPFDSRMILG  240
NMYHPQSVKV EEQCMFTAEE SCNFFSVDQA PTLQWYFTGQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15988KKRRLSIEQVKALEKYFEVENKLEPERKVK
2107115RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22430.12e-49HD-ZIP family protein