PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022772312.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 338aa MW: 38218.6 Da PI: 4.9016

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022772312.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61	2.4e-19	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++l+d+++++G g+W+ ++ g++R++k+c++rw +yl XP_022772312.1 15 RGPWTPEEDQKLIDYINEHGHGSWRVLPKLAGLNRCGKSCRLRWTNYL 62 89********************************************97 PP
2	Myb_DNA-binding	53.7	4.7e-17	68	112	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+T+eE+ +++++ lG++ W++Ia +++ gRt++++k++w+++ XP_022772312.1 68 RGRFTEEEEXVIINLHSFLGNK-WSRIATHLP-GRTDNEIKNFWNTH 112 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MGRSPCCAED ANLKRGPWTP EEDQKLIDYI NEHGHGSWRV LPKLAGLNRC GKSCRLRWTN 60 YLRPDIKRGR FTEEEEXVII NLHSFLGNKW SRIATHLPGR TDNEIKNFWN THIRKKLLNM 120 GIDPHTHKPR TDVDHLLHLS PLLCAAQLAN LMNPWDTAFK LQADAAQLAK AQLLQNLMQI 180 MNANKLANVE SSGFLGSQDL YPFEGVLNTT GTLSAKEVTP TPQSTPNNAG GIPQTLSNDQ 240 AVEIPSEYFQ GGFNYDSLDM NNQSLNNSFE RTENPLPELI SGSLETSPIN QMENKTDTAP 300 DTTIYEDWEK LIMEDEADDS YWKEIVDFTS TFPSPISW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02940.1	7e-85	MYB family protein