PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022772317.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 578aa MW: 64025.4 Da PI: 6.6469

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022772317.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76.4	3.2e-24	116	217	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+ltpsd+++ g +++p+ +a+++ ++ + tl+++d +gr+We+++iyr++++r++lt+GW++F ++++L +gD+vvF++d + XP_022772317.1 116 FAKILTPSDANNGGGFSVPRFCADSIfppldynADPPVQ--TLSVTDVRGRVWEFRHIYRGTPRRHLLTTGWSKFINQKKLIAGDSVVFMRD--R 206 89*******************999996445444..8**********************************************54..5 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 + +++++v+r+ XP_022772317.1 207 NWKMYIGVRRA 217 66689999885 PP
2	Auxin_resp	85	1.5e-28	255	338	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++ +FevvY+Pra++++Fvv++e ve+ l+ ++ G+R+kma+etedss+ ++ +Gtvv+ d+ W +S+Wr+L+ XP_022772317.1 255 AAETAAKGLPFEVVYYPRAGWADFVVRAELVEAGLNLFWARGTRVKMAVETEDSSRMTWfQGTVVSAAVPDSGPWIGSPWRMLQ 338 688999****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 578 aa Download sequence
MPPLRPPHAE VCHVDSRIWR ASAGSSVQIP TVNSRVYYFP QGHVEQACGS TALLSSLVLS 60 TPLIHCVISD VHCLADTKTD EAFAKLLLVP VEPSRIPNRF LNINCEVEDS DKVVSFAKIL 120 TPSDANNGGG FSVPRFCADS IFPPLDYNAD PPVQTLSVTD VRGRVWEFRH IYRGTPRRHL 180 LTTGWSKFIN QKKLIAGDSV VFMRDRNWKM YIGVRRAMKG GEGGGDSGRW REPSDVGVMK 240 GEGRGRMTAE AVAEAAETAA KGLPFEVVYY PRAGWADFVV RAELVEAGLN LFWARGTRVK 300 MAVETEDSSR MTWFQGTVVS AAVPDSGPWI GSPWRMLQVA WHEPEVLQNA RRVSPWQVEI 360 VSSSPLHSSF PSAKKFKFSQ DSGLTNAEGE IFFPMIGLTN STMGYMNPSL LNYNSFPAGM 420 QGARQNHFHL QSLTNSMSEN TPMMYTDNFS GNYMVPKLNT ISTELNIGSS QSDDLSLGSK 480 SSMVSFDTEP TENGGCNSSK VGVRSFQLFG KIIHMKEPVG SRFDDVGCME DDGDKRYDEA 540 TSLKNSLDLS LTYGYSKLLD RLDVQWQRVS DFKVSPCE

Sequence ? help Back to Top

Protein Sequence Length: 578 aa Download sequence

MPPLRPPHAE VCHVDSRIWR ASAGSSVQIP TVNSRVYYFP QGHVEQACGS TALLSSLVLS  60
TPLIHCVISD VHCLADTKTD EAFAKLLLVP VEPSRIPNRF LNINCEVEDS DKVVSFAKIL  120
TPSDANNGGG FSVPRFCADS IFPPLDYNAD PPVQTLSVTD VRGRVWEFRH IYRGTPRRHL  180
LTTGWSKFIN QKKLIAGDSV VFMRDRNWKM YIGVRRAMKG GEGGGDSGRW REPSDVGVMK  240
GEGRGRMTAE AVAEAAETAA KGLPFEVVYY PRAGWADFVV RAELVEAGLN LFWARGTRVK  300
MAVETEDSSR MTWFQGTVVS AAVPDSGPWI GSPWRMLQVA WHEPEVLQNA RRVSPWQVEI  360
VSSSPLHSSF PSAKKFKFSQ DSGLTNAEGE IFFPMIGLTN STMGYMNPSL LNYNSFPAGM  420
QGARQNHFHL QSLTNSMSEN TPMMYTDNFS GNYMVPKLNT ISTELNIGSS QSDDLSLGSK  480
SSMVSFDTEP TENGGCNSSK VGVRSFQLFG KIIHMKEPVG SRFDDVGCME DDGDKRYDEA  540
TSLKNSLDLS LTYGYSKLLD RLDVQWQRVS DFKVSPCE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77850.1	1e-158	ARF family protein