PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022772459.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 331aa MW: 36712.2 Da PI: 6.9019

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022772459.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.7	3.2e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv+ +kq+G g+W++ +r g++R++k+c++rw +yl XP_022772459.1 14 KGPWTPEEDQKLVHHIKQHGHGSWRALPRLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.5	5.7e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++++E++ +++++ lG++ W++Ia +++ gRt++++k++w+++l XP_022772459.1 67 RGKFSQDEEQTILHLHSILGNK-WSAIATHLP-GRTDNEIKNFWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MGRSPCCDEN GLKKGPWTPE EDQKLVHHIK QHGHGSWRAL PRLAGLNRCG KSCRLRWTNY 60 LKPDIKRGKF SQDEEQTILH LHSILGNKWS AIATHLPGRT DNEIKNFWNT HLKKKLIQMG 120 IDPMTHQPRT DIFASLPQLI ALASLRDLVE ISTTHPLDEH AVRLQAEAAQ LAKLQYLQIL 180 VQSAATTSNN SYSQNGIADM EASNLLNSSV PHIKENHVLP FSLGNATSQP LHHPTLLSHL 240 PDPQVPFSFQ TSLNGETGHC SNFTMVSPGD NQTDNSSSWL LPSLTLPPTV TETSLSNPGD 300 ASSTTSYNNN GAASPYWPEL YFEDSVMHDI S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	1e-109	MYB family protein