PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022772467.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 89aa    MW: 10095.7 Da    PI: 9.2454
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022772467.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF85.62.9e-27959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien+s rqvt+skRrngi+ KA+E+Sv+Cda+va+i+f+s+gk++ y+s
  XP_022772467.1  9 KRIENSSSRQVTYSKRRNGIMNKAKEISVMCDARVALIVFASSGKMHHYCS 59
                    79***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MGRGKIEIKR IENSSSRQVT YSKRRNGIMN KAKEISVMCD ARVALIVFAS SGKMHHYCSP  60
STQWMSEKMV ETEVDKLVVI EVDMADKAE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G20240.11e-29MIKC_MADS family protein