PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022772519.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 1076aa MW: 119485 Da PI: 7.9918

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022772519.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	126.8	8.7e-40	151	228	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +C+v++C++dls+ak+yhrrhkvCe+hska++vlv +++qrfCqqCsrfh lsefDe+krsCr rLa+hn+rrrk+q+ XP_022772519.1 151 MCHVDNCKEDLSNAKDYHRRHKVCEFHSKATKVLVGKQMQRFCQQCSRFHPLSEFDEGKRSCRCRLAGHNRRRRKTQP 228 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1076 aa Download sequence
MEEVGAQLAP PIFIHQALAS RFCEPPSLPR KRDLSHQTPP FHFQNPSQQR VANPRDNWNP 60 KLWEWDTVRF IAKPLDTEIL QPGTATSDQR KKDPANGNEN SVNSKKSTMV NEEDESLQLN 120 LGGGLNSVEE PVSRPNKKVR SGFPGSINYP MCHVDNCKED LSNAKDYHRR HKVCEFHSKA 180 TKVLVGKQMQ RFCQQCSRFH PLSEFDEGKR SCRCRLAGHN RRRRKTQPED MTSRLLHPVN 240 RDNTENGNFD IVNLLTALAQ TQGKNEGKSI NCTSIPNSDR LIEILSKINS LPLPMDLAAK 300 LPNVGVFNRK NLEQALLGHQ LIGKNISSQS AVDLIAALSA TLTSSSSEAL AILSQRSSQS 360 SDSKKTKLTC PDNVPAPSAQ NRAPLEFTSV GRDRSSTSYQ SPIEDSECQI QEIRATLPLQ 420 LFSSLPGDDS PPKLASSRNY FSSESSNPLE ERSPSSSPVM RKLYPVHSTA EAVKYEKMLI 480 GRDTNTNAEG SRIQGSILPL ELFSGSKSGT GHASFQHLPS QAGYMSSSGS DHSPSSLNSD 540 AQQDQTGRII FKLFDKDPSH FPGTLRTQIY NWLSNSPSEM ESYIRPGCVV LSVYVSMSSD 600 AWEQLEGNLL QYVNCLLQDS GSDFWKKARF LVHTGRQLAS HKDGKIRLCK TWRSWSSPEL 660 ISVSPLAIVG GQETSLLVRG RNLTNPGTEI RCAYDGGYTS MQISGSAYLG TAYDEVNMGG 720 LKIQVSSLSA FCRCFIEVEN GFKGNSFPII IADATICKEL RLLESEFDVE AKASDIISEE 780 HAYDYCQPRS REEVLHFLNE LGWLFQRRST CPLPKSSDYS LCRFKFLLIF SVERDYCALV 840 KVLLDMLVES NLDVDGLSRE SLAMLAEIQL LSRAVKRRCR KMADLLIHYS LSSSDENKKY 900 IFPPNLEGAG GITPLHLAAC TSGSEGMVDV LTNDPQEIGL SCWNSLLDAN GQSPYAYAAM 960 RNNHSYNKLL AGKFADRRNG QVSLRIGIED KLTAVLLHEK SSRFKQEHTS CAKCAIVATK 1020 FNRRFPSSQG LIQRPYVHSM LAIAAVCVCV CLFLRGSPDI GCVAPFKWET LDFGTI

Sequence ? help Back to Top

Protein Sequence Length: 1076 aa Download sequence

MEEVGAQLAP PIFIHQALAS RFCEPPSLPR KRDLSHQTPP FHFQNPSQQR VANPRDNWNP  60
KLWEWDTVRF IAKPLDTEIL QPGTATSDQR KKDPANGNEN SVNSKKSTMV NEEDESLQLN  120
LGGGLNSVEE PVSRPNKKVR SGFPGSINYP MCHVDNCKED LSNAKDYHRR HKVCEFHSKA  180
TKVLVGKQMQ RFCQQCSRFH PLSEFDEGKR SCRCRLAGHN RRRRKTQPED MTSRLLHPVN  240
RDNTENGNFD IVNLLTALAQ TQGKNEGKSI NCTSIPNSDR LIEILSKINS LPLPMDLAAK  300
LPNVGVFNRK NLEQALLGHQ LIGKNISSQS AVDLIAALSA TLTSSSSEAL AILSQRSSQS  360
SDSKKTKLTC PDNVPAPSAQ NRAPLEFTSV GRDRSSTSYQ SPIEDSECQI QEIRATLPLQ  420
LFSSLPGDDS PPKLASSRNY FSSESSNPLE ERSPSSSPVM RKLYPVHSTA EAVKYEKMLI  480
GRDTNTNAEG SRIQGSILPL ELFSGSKSGT GHASFQHLPS QAGYMSSSGS DHSPSSLNSD  540
AQQDQTGRII FKLFDKDPSH FPGTLRTQIY NWLSNSPSEM ESYIRPGCVV LSVYVSMSSD  600
AWEQLEGNLL QYVNCLLQDS GSDFWKKARF LVHTGRQLAS HKDGKIRLCK TWRSWSSPEL  660
ISVSPLAIVG GQETSLLVRG RNLTNPGTEI RCAYDGGYTS MQISGSAYLG TAYDEVNMGG  720
LKIQVSSLSA FCRCFIEVEN GFKGNSFPII IADATICKEL RLLESEFDVE AKASDIISEE  780
HAYDYCQPRS REEVLHFLNE LGWLFQRRST CPLPKSSDYS LCRFKFLLIF SVERDYCALV  840
KVLLDMLVES NLDVDGLSRE SLAMLAEIQL LSRAVKRRCR KMADLLIHYS LSSSDENKKY  900
IFPPNLEGAG GITPLHLAAC TSGSEGMVDV LTNDPQEIGL SCWNSLLDAN GQSPYAYAAM  960
RNNHSYNKLL AGKFADRRNG QVSLRIGIED KLTAVLLHEK SSRFKQEHTS CAKCAIVATK  1020
FNRRFPSSQG LIQRPYVHSM LAIAAVCVCV CLFLRGSPDI GCVAPFKWET LDFGTI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	873	878	RAVKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	0.0	SBP family protein