PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022772520.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 1075aa MW: 119357 Da PI: 7.9918

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022772520.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	126.8	8.7e-40	151	228	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +C+v++C++dls+ak+yhrrhkvCe+hska++vlv +++qrfCqqCsrfh lsefDe+krsCr rLa+hn+rrrk+q+ XP_022772520.1 151 MCHVDNCKEDLSNAKDYHRRHKVCEFHSKATKVLVGKQMQRFCQQCSRFHPLSEFDEGKRSCRCRLAGHNRRRRKTQP 228 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1075 aa Download sequence
MEEVGAQLAP PIFIHQALAS RFCEPPSLPR KRDLSHQTPP FHFQNPSQQR VANPRDNWNP 60 KLWEWDTVRF IAKPLDTEIL QPGTATSDQR KKDPANGNEN SVNSKKSTMV NEEDESLQLN 120 LGGGLNSVEE PVSRPNKKVR SGFPGSINYP MCHVDNCKED LSNAKDYHRR HKVCEFHSKA 180 TKVLVGKQMQ RFCQQCSRFH PLSEFDEGKR SCRCRLAGHN RRRRKTQPED MTSRLLHPVN 240 RDNTENGNFD IVNLLTALAQ TQGKNEGKSI NCTSIPNSDR LIEILSKINS LPLPMDLAAK 300 LPNVGVFNRK NLEQALLGHQ LIGKNISSQS AVDLIAALSA TLTSSSSEAL AILSQRSSQS 360 SDSKKTKLTC PDNVPAPSAQ NRAPLEFTSV GRDRSSTSYQ SPIEDSECQI QEIRATLPLQ 420 LFSSLPGDDS PPKLASSRNY FSSESSNPLE ERSPSSSPVM RKLYPVHSTA EAVKYEKMLI 480 GRDTNTNAEG SRIQGSILPL ELFSGSKSGT GHASFQHLPS QAGYMSSSGS DHSPSSLNSD 540 AQDQTGRIIF KLFDKDPSHF PGTLRTQIYN WLSNSPSEME SYIRPGCVVL SVYVSMSSDA 600 WEQLEGNLLQ YVNCLLQDSG SDFWKKARFL VHTGRQLASH KDGKIRLCKT WRSWSSPELI 660 SVSPLAIVGG QETSLLVRGR NLTNPGTEIR CAYDGGYTSM QISGSAYLGT AYDEVNMGGL 720 KIQVSSLSAF CRCFIEVENG FKGNSFPIII ADATICKELR LLESEFDVEA KASDIISEEH 780 AYDYCQPRSR EEVLHFLNEL GWLFQRRSTC PLPKSSDYSL CRFKFLLIFS VERDYCALVK 840 VLLDMLVESN LDVDGLSRES LAMLAEIQLL SRAVKRRCRK MADLLIHYSL SSSDENKKYI 900 FPPNLEGAGG ITPLHLAACT SGSEGMVDVL TNDPQEIGLS CWNSLLDANG QSPYAYAAMR 960 NNHSYNKLLA GKFADRRNGQ VSLRIGIEDK LTAVLLHEKS SRFKQEHTSC AKCAIVATKF 1020 NRRFPSSQGL IQRPYVHSML AIAAVCVCVC LFLRGSPDIG CVAPFKWETL DFGTI

Sequence ? help Back to Top

Protein Sequence Length: 1075 aa Download sequence

MEEVGAQLAP PIFIHQALAS RFCEPPSLPR KRDLSHQTPP FHFQNPSQQR VANPRDNWNP  60
KLWEWDTVRF IAKPLDTEIL QPGTATSDQR KKDPANGNEN SVNSKKSTMV NEEDESLQLN  120
LGGGLNSVEE PVSRPNKKVR SGFPGSINYP MCHVDNCKED LSNAKDYHRR HKVCEFHSKA  180
TKVLVGKQMQ RFCQQCSRFH PLSEFDEGKR SCRCRLAGHN RRRRKTQPED MTSRLLHPVN  240
RDNTENGNFD IVNLLTALAQ TQGKNEGKSI NCTSIPNSDR LIEILSKINS LPLPMDLAAK  300
LPNVGVFNRK NLEQALLGHQ LIGKNISSQS AVDLIAALSA TLTSSSSEAL AILSQRSSQS  360
SDSKKTKLTC PDNVPAPSAQ NRAPLEFTSV GRDRSSTSYQ SPIEDSECQI QEIRATLPLQ  420
LFSSLPGDDS PPKLASSRNY FSSESSNPLE ERSPSSSPVM RKLYPVHSTA EAVKYEKMLI  480
GRDTNTNAEG SRIQGSILPL ELFSGSKSGT GHASFQHLPS QAGYMSSSGS DHSPSSLNSD  540
AQDQTGRIIF KLFDKDPSHF PGTLRTQIYN WLSNSPSEME SYIRPGCVVL SVYVSMSSDA  600
WEQLEGNLLQ YVNCLLQDSG SDFWKKARFL VHTGRQLASH KDGKIRLCKT WRSWSSPELI  660
SVSPLAIVGG QETSLLVRGR NLTNPGTEIR CAYDGGYTSM QISGSAYLGT AYDEVNMGGL  720
KIQVSSLSAF CRCFIEVENG FKGNSFPIII ADATICKELR LLESEFDVEA KASDIISEEH  780
AYDYCQPRSR EEVLHFLNEL GWLFQRRSTC PLPKSSDYSL CRFKFLLIFS VERDYCALVK  840
VLLDMLVESN LDVDGLSRES LAMLAEIQLL SRAVKRRCRK MADLLIHYSL SSSDENKKYI  900
FPPNLEGAGG ITPLHLAACT SGSEGMVDVL TNDPQEIGLS CWNSLLDANG QSPYAYAAMR  960
NNHSYNKLLA GKFADRRNGQ VSLRIGIEDK LTAVLLHEKS SRFKQEHTSC AKCAIVATKF  1020
NRRFPSSQGL IQRPYVHSML AIAAVCVCVC LFLRGSPDIG CVAPFKWETL DFGTI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	872	877	RAVKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	0.0	SBP family protein