PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022772671.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 896aa MW: 98900 Da PI: 4.89

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022772671.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76.9	2.2e-24	149	250	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++p++ ae+ ++++ + ++l+++d++ ++W++++iyr++++r++lt+GW+ Fv +++L++gD+v+F +++ XP_022772671.1 149 FCKTLTASDTSTHGGFSVPRRAAEKLfppldytMQPP-T-QELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFI--RDE 239 99*******************999*954444.4.38********************************************..457 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 + +l+v+v+r+ XP_022772671.1 240 KSQLLVGVRRA 250 7778***97 PP
2	Auxin_resp	28	9.1e-11	292	317	58	83
Auxin_resp 58 rlsGtvvgvsdldpvrWpnSkWrsLk 83 r++Gt+vg+sdldp+rWp+SkWr+L+ XP_022772671.1 292 RYMGTIVGISDLDPLRWPGSKWRNLQ 317 68**********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 896 aa Download sequence
MGSVVEEKIK TGALVNVGAQ ATLLEEMKLL KEMQDQSGTQ KAINSELWHA CAGPLVFLPQ 60 VGSLVYYFPQ GHSEQVAVST KRMATSRIPN YPNLPSQLMC QVRNVTLHAD RDTDEIYAQI 120 SLQTVNSEKD VFHIPDFGFK PSKHPSEFFC KTLTASDTST HGGFSVPRRA AEKLFPPLDY 180 TMQPPTQELV VRDLHDNTWT FRHIYRGQPK RHLLTTGWSL FVGSKRLRAG DSVLFIRDEK 240 SQLLVGVRRA NRQQTTLPSS VLSADSMHIG VLAAAAHAAA NRSPFTIFYN PRYMGTIVGI 300 SDLDPLRWPG SKWRNLQVEW DEPGCNDKQN RVSAWEIETP ESLFIFPSLT SGLKRPLYPG 360 ILGVESEWGS LIKRPLLQFP ENGNGNLPYS ISNLCSEQLM KMMLKPQPVN PPGIFASTLQ 420 QTSAAKGSPL EEMKNVQSTS NQKPQLIQTE NLLIENQNLS QLVPYQPDPI NSNLSNINGN 480 GSLHPANKFE SQTQARSKNE KLKLEPEHAT DQLSQLTSTS KCNEEKLTAN AISPTILNQL 540 SFPNQNQIPC QLQNNPGPIQ SQLESSLVQA HQLQVSQADI STLSSFLPFL DTDEWMSNLS 600 PCQPLAGNYR SPGSIPESGL QDSSVIFPEA TNPLTTGGQD TWDHQLNNCR FLSQADQLAS 660 FTQQDPCGLS SGEVRDLSDD SNNQSGIYSC LNIDVCNGGS AVIDPSVSSV ILDEFCSLKE 720 AEFQNPSDCL VGNFSSSQDV QSQITSASLA DSQAFSRQDL PDSSGGTSSS NVDFDESGLL 780 LNNSWQQMAP RVRTYTKVQK AGSVGRSIDV NSFKNYDELI SAIERMFGLN GLLEDPKGSG 840 WKLVYVDYEN DVLLVGDDPW EAFVGCVRCI RILSPTEVQQ MSEEGMKLLN IATEMH

Sequence ? help Back to Top

Protein Sequence Length: 896 aa Download sequence

MGSVVEEKIK TGALVNVGAQ ATLLEEMKLL KEMQDQSGTQ KAINSELWHA CAGPLVFLPQ  60
VGSLVYYFPQ GHSEQVAVST KRMATSRIPN YPNLPSQLMC QVRNVTLHAD RDTDEIYAQI  120
SLQTVNSEKD VFHIPDFGFK PSKHPSEFFC KTLTASDTST HGGFSVPRRA AEKLFPPLDY  180
TMQPPTQELV VRDLHDNTWT FRHIYRGQPK RHLLTTGWSL FVGSKRLRAG DSVLFIRDEK  240
SQLLVGVRRA NRQQTTLPSS VLSADSMHIG VLAAAAHAAA NRSPFTIFYN PRYMGTIVGI  300
SDLDPLRWPG SKWRNLQVEW DEPGCNDKQN RVSAWEIETP ESLFIFPSLT SGLKRPLYPG  360
ILGVESEWGS LIKRPLLQFP ENGNGNLPYS ISNLCSEQLM KMMLKPQPVN PPGIFASTLQ  420
QTSAAKGSPL EEMKNVQSTS NQKPQLIQTE NLLIENQNLS QLVPYQPDPI NSNLSNINGN  480
GSLHPANKFE SQTQARSKNE KLKLEPEHAT DQLSQLTSTS KCNEEKLTAN AISPTILNQL  540
SFPNQNQIPC QLQNNPGPIQ SQLESSLVQA HQLQVSQADI STLSSFLPFL DTDEWMSNLS  600
PCQPLAGNYR SPGSIPESGL QDSSVIFPEA TNPLTTGGQD TWDHQLNNCR FLSQADQLAS  660
FTQQDPCGLS SGEVRDLSDD SNNQSGIYSC LNIDVCNGGS AVIDPSVSSV ILDEFCSLKE  720
AEFQNPSDCL VGNFSSSQDV QSQITSASLA DSQAFSRQDL PDSSGGTSSS NVDFDESGLL  780
LNNSWQQMAP RVRTYTKVQK AGSVGRSIDV NSFKNYDELI SAIERMFGLN GLLEDPKGSG  840
WKLVYVDYEN DVLLVGDDPW EAFVGCVRCI RILSPTEVQQ MSEEGMKLLN IATEMH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19850.1	0.0	ARF family protein