PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022772681.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family BBR-BPC
Protein Properties Length: 336aa    MW: 37233.2 Da    PI: 10.046
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022772681.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind388.69.1e-11913361301
       GAGA_bind   1 mdddgsre..rnkg.yyepa...aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllven 89 
                     mdd g+re  r k+ +y+pa     +++   +q+m+++aerda+i+ernlalsekkaa+aerdmaflqrd+a+aern a++erdn++++l+++en
  XP_022772681.1   1 MDDGGHREngRLKTdQYRPAqgqWLMHQPSMKQIMTIMAERDAAIQERNLALSEKKAAIAERDMAFLQRDAAIAERNSAILERDNAIANLQYREN 95 
                     99****9999999999*987663445666678*************************************************************** PP

       GAGA_bind  90 sla....salpvgvqvlsgtksidslqq.lse.pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkak.kkkkksekskkk 177
                     sla    s++p+g+q+++g k++++ qq +++ p++++ +++ re++ +++lp++  +++ +++++ k+ ++ak+  ++k+  k+ kk + ++++
  XP_022772681.1  96 SLAssnmSSCPPGCQISRGLKHMQHPQQnVHHlPHISEAPYNSREMHSTDTLPVTPGTSDGTKSRQGKRAKEAKVIASNKKAsKPPKKVKRENED 190
                     999899999*******************76779********************988777777777666555555443333222333333333333 PP

       GAGA_bind 178 vkkesader............................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPL 244
                      +      +                            +k+++k +dl+ln++ +Dest+ +PvCsCtG+lrqCYkWGnGGWqS+CCttt+S+yPL
  XP_022772681.1 191 LN------KimfgkshewkggqdvggggddlnkqlvaTKSDRKGQDLGLNQIVFDESTMSPPVCSCTGVLRQCYKWGNGGWQSSCCTTTLSMYPL 279
                     33......13444457899**************************************************************************** PP

       GAGA_bind 245 PvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     P+ +++++aRi+grKmS++af+klL++LaaeG+dlsnpvDLkdhWAkHGtn+++ti+
  XP_022772681.1 280 PAIPNKKHARIGGRKMSGSAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK 336
                     ********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MDDGGHRENG RLKTDQYRPA QGQWLMHQPS MKQIMTIMAE RDAAIQERNL ALSEKKAAIA  60
ERDMAFLQRD AAIAERNSAI LERDNAIANL QYRENSLASS NMSSCPPGCQ ISRGLKHMQH  120
PQQNVHHLPH ISEAPYNSRE MHSTDTLPVT PGTSDGTKSR QGKRAKEAKV IASNKKASKP  180
PKKVKRENED LNKIMFGKSH EWKGGQDVGG GGDDLNKQLV ATKSDRKGQD LGLNQIVFDE  240
STMSPPVCSC TGVLRQCYKW GNGGWQSSCC TTTLSMYPLP AIPNKKHARI GGRKMSGSAF  300
NKLLSRLAAE GHDLSNPVDL KDHWAKHGTN RYITIK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175183KKASKPPKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-150BBR-BPC family protein