PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022772855.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Protein Properties

Length: 378aa MW: 43415.1 Da PI: 6.9476

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022772855.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.2	6.5e-18	34	112	13	97
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ++rl +p kf++++++k + t+tl+ + g W+v + + +++ ++ +GWk+Fvk++ L e+Df++Fk++g s+f v +f XP_022772855.1 34 LQRLEVPEKFTKNIKKK--LPETVTLKGPGGIIWDVGV--TEDDDALFFDRGWKNFVKDHSLVENDFLIFKFNGVSNF--DVLMF 112 56899****888755..888************..*****************************9998888..66665 PP
2	B3	51.9	1.3e-16	266	346	1	84
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 f ++p +v ++ +++p +++h +k++ +++l + r+W+ +++y ++++ l++GW++Fv++n+L+e D++vF+ XP_022772855.1 266 FMVLMKPTHVERRFYMSIPTAWVAKHLSKENA--DVIL-RINKRTWRTRFNYHRSRNCGGLSGGWRNFVNDNDLQEHDVCVFEP 346 6678999*****************766444..5664.5689***9977777777********************94 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MGDKYKDCRS WEEEIFWTHF QSINFSQFLR GDFLQRLEVP EKFTKNIKKK LPETVTLKGP 60 GGIIWDVGVT EDDDALFFDR GWKNFVKDHS LVENDFLIFK FNGVSNFDVL MFDGRSLCEK 120 ASSYFVRKCG HTEFDSGYQT ERKMNKNPDE IVYNSPQCGL ESRPEKSPKN DIDMRPPREP 180 INSAATNKKM RNVGSSTRSI HARESLGGEE LSSFSGEVKV ETEFEHTSMD GDVFFPQHAS 240 CKRPATQVEK TNVLLMAQEA LAEEGFMVLM KPTHVERRFY MSIPTAWVAK HLSKENADVI 300 LRINKRTWRT RFNYHRSRNC GGLSGGWRNF VNDNDLQEHD VCVFEPANIG RKPIILDVTI 360 FHVLEAAVPL TQLHPASS

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MGDKYKDCRS WEEEIFWTHF QSINFSQFLR GDFLQRLEVP EKFTKNIKKK LPETVTLKGP  60
GGIIWDVGVT EDDDALFFDR GWKNFVKDHS LVENDFLIFK FNGVSNFDVL MFDGRSLCEK  120
ASSYFVRKCG HTEFDSGYQT ERKMNKNPDE IVYNSPQCGL ESRPEKSPKN DIDMRPPREP  180
INSAATNKKM RNVGSSTRSI HARESLGGEE LSSFSGEVKV ETEFEHTSMD GDVFFPQHAS  240
CKRPATQVEK TNVLLMAQEA LAEEGFMVLM KPTHVERRFY MSIPTAWVAK HLSKENADVI  300
LRINKRTWRT RFNYHRSRNC GGLSGGWRNF VNDNDLQEHD VCVFEPANIG RKPIILDVTI  360
FHVLEAAVPL TQLHPASS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	1e-85	B3 family protein