PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022772895.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 305aa MW: 33458.7 Da PI: 7.8966

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022772895.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.3	7.5e-18	12	57	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd l ++v+ +G+++W++I++ ++ gR++k+c++rw + XP_022772895.1 12 KGPWSPEEDAALQRLVQTYGPRNWSLISKSIP-GRSGKSCRLRWCNQ 57 79****************************.*********985 PP
2	Myb_DNA-binding	56.1	8.5e-18	66	108	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEd+ +++a++++G++ W+tIar ++ gRt++ +k++w++ XP_022772895.1 66 PFTPEEDDTIIRAHARFGNK-WATIARLLN-GRTDNAIKNHWNST 108 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MASTRKDVDR IKGPWSPEED AALQRLVQTY GPRNWSLISK SIPGRSGKSC RLRWCNQLSP 60 EVEHRPFTPE EDDTIIRAHA RFGNKWATIA RLLNGRTDNA IKNHWNSTLK RKCSSMTDDL 120 NDDSPQPLKR SASLGTGNNV SGLYLNPSSP LGSDLSDLSL PATSPVHRPL ARADSLVPST 180 QHMETASSTT DPPTLLSLSL PGSDSCEISD QGPVSNPIPS PTQVTTAPPA PASIPAVQLQ 240 QVGVQNGEFR MEKQFFSAEF LAVMQEMIRK EVRNYMAGIE QNGLCFQTEA IRNSVVNRIG 300 ISKIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	2e-74	MYB family protein