PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773014.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 239aa MW: 27506.3 Da PI: 9.8017

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773014.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	90.1	1.2e-28	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRr+g+lKKA+ELS+LCdaev viifsstgkly+++s XP_022773014.1 10 RIDNSTSRQVTFSKRRKGLLKKAKELSILCDAEVGVIIFSSTGKLYDFAS 59 8***********************************************86 PP
2	K-box	86.9	4.1e-29	76	170	4	98
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++ ++ +++ + +q+e+a L ++++nLq+++R+++Ge+L+ L +k+Lq+Le+qLe sl+ +R kK+++l+++i+el +k ++++++n +L kk+ XP_022773014.1 76 HQQLRNPTSEIKFWQREAAILSQQLQNLQENHRQMMGEELSGLGVKDLQNLESQLEMSLRGVRMKKDQILMDEIQELNRKGNQIHQANVELYKKV 170 44445788999********************************************************************************9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MGRGKIVIRR IDNSTSRQVT FSKRRKGLLK KAKELSILCD AEVGVIIFSS TGKLYDFAST 60 STRTVIDRYN KTKEEHQQLR NPTSEIKFWQ REAAILSQQL QNLQENHRQM MGEELSGLGV 120 KDLQNLESQL EMSLRGVRMK KDQILMDEIQ ELNRKGNQIH QANVELYKKV YGKRNMNDAN 180 KDSLLTNGLS FGEDSNVPVH LQLSQPQQQN YETPSRATKL GYIFLHIVND FDTDYIATI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57230.1	1e-105	MIKC_MADS family protein