PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773417.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ERF

Protein Properties

Length: 442aa MW: 47522.1 Da PI: 6.7099

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773417.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	64.6	2e-20	220	269	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g XP_022773417.1 220 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 269 7******.******7.....337***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MCLPNKVAHQ RGSGEYVRFP PVGDGGGGTE EQQQDSYSQE IQPQLSQIRE LNQPVMQHGN 60 QAEIFFGSQS QASEMSAIVS ALTHVVSGQR ATDWGYGANL AGMVSSSFGP THSGSAAAPS 120 AVYSPSYSSS SASPSGSGSG LWIGQKRGRE EEGTAQLIES VPRVQRAFAD FRGSHADSSS 180 GATAVTEETT NVIAPPTTST ETAVGAASAS HEETGERRRR YRGVRQRPWG KWAAEIRDPH 240 KAARVWLGTF DTAEAAARAY DEAALRFRGN RAKLNFPENV RLAPQPMQNF PAIQTSVSTS 300 VTTHFPPSHF MPVPSYYQSQ PLQSSTADMM RDYWQYSQLL QSSTDFHGQP ATSLLEHMIQ 360 SSQLPNIQQP LLSSSLSSLP SSFAASSASG SSSSSSAAFP LLFAEQQQMG IFRQPSNQTQ 420 ASGSDFPVPP WSHPSHYPPS TS

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MCLPNKVAHQ RGSGEYVRFP PVGDGGGGTE EQQQDSYSQE IQPQLSQIRE LNQPVMQHGN  60
QAEIFFGSQS QASEMSAIVS ALTHVVSGQR ATDWGYGANL AGMVSSSFGP THSGSAAAPS  120
AVYSPSYSSS SASPSGSGSG LWIGQKRGRE EEGTAQLIES VPRVQRAFAD FRGSHADSSS  180
GATAVTEETT NVIAPPTTST ETAVGAASAS HEETGERRRR YRGVRQRPWG KWAAEIRDPH  240
KAARVWLGTF DTAEAAARAY DEAALRFRGN RAKLNFPENV RLAPQPMQNF PAIQTSVSTS  300
VTTHFPPSHF MPVPSYYQSQ PLQSSTADMM RDYWQYSQLL QSSTDFHGQP ATSLLEHMIQ  360
SSQLPNIQQP LLSSSLSSLP SSFAASSASG SSSSSSAAFP LLFAEQQQMG IFRQPSNQTQ  420
ASGSDFPVPP WSHPSHYPPS TS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	216	221	ERRRRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50080.1	1e-16	ERF family protein