PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773419.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 233aa MW: 26193.3 Da PI: 9.6101

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773419.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.1	9.7e-19	35	80	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v+++G+++W++I+r++ gR++k+c++rw + XP_022773419.1 35 KGPWSAEEDRILTRLVERYGPRNWSLISRYIK-GRSGKSCRLRWCNQ 80 79***************************9.*********985 PP
2	Myb_DNA-binding	53.4	5.7e-17	89	131	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ede ++ a++++G++ W+tIar ++ gRt++ +k++w++ XP_022773419.1 89 PFSQAEDETILAAHARFGNR-WATIARLLP-GRTDNAVKNHWNST 131 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MEGMNACSSS TSSSDTSSSE SSFSARASNK DEKIKGPWSA EEDRILTRLV ERYGPRNWSL 60 ISRYIKGRSG KSCRLRWCNQ LSPKVEHRPF SQAEDETILA AHARFGNRWA TIARLLPGRT 120 DNAVKNHWNS TLKRRAREGQ QQHQPRLLHP QEQIIQSTHH QQVEGGDSAL ASVGMMMDEE 180 ALTALTLAPP GSGSTVVAEG RKREERVPAE FWDLMRNVIA REVREYMSST LSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	2e-59	MYB family protein