PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773527.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 340aa MW: 38865.8 Da PI: 8.781

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773527.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.9	2e-17	51	98	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++ +G g+W++ ++ g+ R++k+c++rw +yl XP_022773527.1 51 KGAWTKEEDQRLIDYIRVHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 98 79****************************99**********97 PP
2	Myb_DNA-binding	59.5	7.1e-19	104	148	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eEdel+++++ +lG++ W++Ia +++ gRt++++k++w+++ XP_022773527.1 104 RGNFTEEEDELIIKLHSLLGNK-WSLIAGRLP-GRTDNEIKNYWNTH 148 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MGCVTCLLLK SSCFRQNLLD KSSGQRPQEE RQERAEFMGR SPCCEKAHTN KGAWTKEEDQ 60 RLIDYIRVHG EGCWRSLPKA AGLLRCGKSC RLRWINYLRP DLKRGNFTEE EDELIIKLHS 120 LLGNKWSLIA GRLPGRTDNE IKNYWNTHIK RKLISRGIDP QTHRPLNETA NTNNTAKATA 180 TVPTKLDFKN ETRVSKTNFI TAPSLDFTYN EFQVKAKTEC LEEGNCTSSG MTTDEEQQQQ 240 HHCHRLQQQH KDKYPSNGQE LNLELSIGIS SAGKISTGLS SANSAQSKPQ LDNNNYQFLE 300 QAMVAKAVCL CWQLGFQRSE ICRNCQNTNG FYRYRRPLDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	2e-96	MYB family protein