PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022773545.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 288aa    MW: 32567.8 Da    PI: 8.8873
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022773545.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.32.7e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+ Ed llv++++ +G g+W++ +++ g+ R++k+c++rw +yl
   XP_022773545.1 14 RGSWTAREDTLLVNYIQAHGEGQWRSLPKRAGLLRCGKSCRLRWMNYL 61
                     89******************************99************97 PP
2Myb_DNA-binding55.11.7e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ T++Ed+l+++++ +lG++ W++Ia++++ gRt++++k++w+++l
   XP_022773545.1  67 RGNITPDEDDLIIRLHSLLGNR-WSLIAKRLP-GRTDNEIKNYWNSHL 112
                      7999******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MGRAPCCSKV GLHRGSWTAR EDTLLVNYIQ AHGEGQWRSL PKRAGLLRCG KSCRLRWMNY  60
LRPDIKRGNI TPDEDDLIIR LHSLLGNRWS LIAKRLPGRT DNEIKNYWNS HLSKRVENSE  120
TNSKTSKEAS IRNNRKGKKT TEKKKDKPES TAREGTTPIV TTKVHQPKAI RVSKFSVITR  180
SNSFDSMISG SSNWGSEGSR RANDIQVFDF PACCSGIAGA TKYIGKAMVC DEDQEFPYCG  240
FDAATFLDET PVGDDTNMLE DIFEEYQQLL KGDDTVEKET PFFYSLLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49330.15e-66MYB family protein