PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773575.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Whirly

Protein Properties

Length: 241aa MW: 26565.5 Da PI: 9.7884

Description

Whirly family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773575.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Whirly	176.4	6.2e-55	64	201	2	137
Whirly 2 vyktkaalkvkavrptfealdsgn..lklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkal 94 vyk+kaa++v + +ptf+++dsg+ lk++r+G ++l++ +a++erkydWek+q+fals+tev++l+++++++ +effhdp++k+sn+G+v k l XP_022773575.1 64 VYKGKAAFSVSPLLPTFSKIDSGSasLKVDRRGCMMLTFWPAVGERKYDWEKRQKFALSPTEVGSLISMGAHDGSEFFHDPSMKSSNAGQVSKKL 158 9******************997225789************************************************************* PP Whirly 95 kvePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsl 137 ++ l G G++++l+vtn+++k+ne+f vP++ aefavl+++ XP_022773575.1 159 YIKALDGGNGYMISLTVTNNILKSNERFNVPLTTAEFAVLKTA 201 *9999******************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MMKLSRSLLS RRLCSQTMLS GKWVDVGDAL CSRAFESPAA FSTSVHDFSA KGISNARVFA 60 PYTVYKGKAA FSVSPLLPTF SKIDSGSASL KVDRRGCMML TFWPAVGERK YDWEKRQKFA 120 LSPTEVGSLI SMGAHDGSEF FHDPSMKSSN AGQVSKKLYI KALDGGNGYM ISLTVTNNIL 180 KSNERFNVPL TTAEFAVLKT ACSFALPHII GWDWLINQSR NDMAGSPSKV NPQLLDLEWD 240 K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71260.1	3e-85	Whirly family protein