PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773639.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 203aa MW: 23666.3 Da PI: 7.2758

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773639.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	83.8	1e-26	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+ks+rqvtf kR+ng++KKAeEL vLCd+e a++ifs+tgkly +ss XP_022773639.1 9 KRIEDKSKRQVTFLKRKNGLIKKAEELAVLCDVELALLIFSPTGKLYQFSS 59 79***********************************************96 PP
2	K-box	49.7	1.6e-17	101	171	30	99
K-box 30 nLq.reqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +Lq Rh G ++e L++ +L+ +e+qL++ l++ R++K++++++ + lq+kekel++en+++ k+++ XP_022773639.1 101 SLQeMVERHTEGHNIEHLNMTQLMLMEKQLDSILRQTRNRKTQVMMDTVAALQEKEKELRQENHNIDKEIA 171 4665778***********************************************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence
MGRRKLQLKR IEDKSKRQVT FLKRKNGLIK KAEELAVLCD VELALLIFSP TGKLYQFSSG 60 ESLKKILDRY LVHAGEEAAV CNSVNEAKIH EEFMDIWKGT SLQEMVERHT EGHNIEHLNM 120 TQLMLMEKQL DSILRQTRNR KTQVMMDTVA ALQEKEKELR QENHNIDKEI AARMDMEDGE 180 RVNQEPHSSI YEPPLQRGLL HLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30260.1	7e-41	MIKC_MADS family protein