PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773675.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

LBD

Protein Properties

Length: 174aa MW: 19416.8 Da PI: 6.8767

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773675.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	143.3	7.5e-45	18	116	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk lrrkC +dC++apyfp e+p+kfanvhk+FGasnv+kll+++p+++reda++sl+yeAear++dPvyG+vg i+ lq+q+++l+ el+ XP_022773675.1 18 PCAACKCLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVPPHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVMRLQRELD 112 7*********************************************************************************************9 PP DUF260 96 llke 99 ++++ XP_022773675.1 113 ATNA 116 9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence
MQLFVAEKMA SSSYSNSPCA ACKCLRRKCM PDCIFAPYFP PEEPQKFANV HKIFGASNVS 60 KLLNEVPPHQ REDAVNSLAY EAEARMKDPV YGCVGAISVL QRQVMRLQRE LDATNADLIR 120 YACNEMPPAA AFQYGRRTET GHGGTSFNQN TGFYYPSQWN DHCGDNERSG DGSM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27650.1	6e-70	LBD family protein