PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022773721.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 283aa    MW: 32208.4 Da    PI: 7.2854
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022773721.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox55.11.3e-1782134456
                     -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     + +++ eq+++Le+ Fe  +++   ++ +LAk lgL+ rq+ +WFqNrRa++k
  XP_022773721.1  82 KKRLNLEQVKALEKSFELGNKLEPGRKMQLAKALGLQPRQIAIWFQNRRARWK 134
                     4568889*********************************************9 PP
2HD-ZIP_I/II125.42.6e-4080170191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     ekk+rl+ eqvk+LE+sFe  +kLep rK++la++Lglqprq+a+WFqnrRAR+ktkqlEkdyeaLk++++alk++n++L++++++L  el
  XP_022773721.1  80 EKKKRLNLEQVKALEKSFELGNKLEPGRKMQLAKALGLQPRQIAIWFQNRRARWKTKQLEKDYEALKKQLEALKADNDALQAQNKKLSVEL 170
                     69*************************************************************************************9877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MIFNIDMAFP PHAFMFQPYD DHDHLPSPTS LNSLPSFPPQ LFHCGAPFMM KRSVSFSGVE  60
KSEGVHGDDE LSDDGSHLGE KKKRLNLEQV KALEKSFELG NKLEPGRKMQ LAKALGLQPR  120
QIAIWFQNRR ARWKTKQLEK DYEALKKQLE ALKADNDALQ AQNKKLSVEL LSLKTKESNE  180
ISIKKENKGS WSNGSDNSCD MNLDFSRTTI ITSPPSSQLS SKHLFPSSIR PTSMTQPLQG  240
SSRPDLQCLK LDQVVQEESF CHMFNGVDEQ QGFWPWTEQQ NFH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1129137RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01220.12e-82HD-ZIP family protein